Chitinimonas koreensis: H9L41_00495
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Entry
H9L41_00495 CDS
T08620
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cks
Chitinimonas koreensis
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cks03032
]
H9L41_00495 (topA)
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_00495 (topA)
Enzymes [BR:
cks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9L41_00495 (topA)
DNA replication proteins [BR:
cks03032
]
Prokaryotic type
DNA Topoisomerases
H9L41_00495 (topA)
DNA repair and recombination proteins [BR:
cks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H9L41_00495 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QNM96871
LinkDB
All DBs
Position
112315..114627
Genome browser
AA seq
770 aa
AA seq
DB search
MADNLLIVESPSKAKTLKKYLGKDFEILASYGHVRGLVRKDGSVDVDHDFAMKYQVIPKN
AKHVDAIVSAVKAAKNVYLATDPDREGEAISWHLLEILKGKKALGEKLVKRVVFHEITES
AVKAAVAHPRDVDSHLVNAQQARSALDYLVGFNLSPLLWRKVRSGLSAGRVQSPALRLIC
EREREIRAFTAQEYWTVHLDSHKGKQKFGARLNEWRGKKLEQFDVPNEATQAEILAAIEG
QPATVLNVEKKRKNRNPAAPFTTSTMQQEAVRKLGMTTDRTMRTAQQLYEGIALGDGTTG
LITYMRTDSVALANEAVAEIREYIGNTFDAESLPASPPVYKSKAKNAQEAHEAIRPTSIL
RTPESVKAFLSAEQYKLYEMIWKRTLASQMSAARFDTTGVDIGVGEAVFRASGQVLVFAG
FLAVYEEDVDDAEDEDNAKLPPLEAGEAVPVDKLYGEQHFTQPPPRYSEASLVKALEEFG
IGRPSTYASIISTLKDREYVILDKKRFLPTDTGEVVNKFLTEHFAQYVDYQFTSKLEDKL
DEISNGERDWIPVMEEFWKGFSEQVEEKKALKRSEVTHEALDEACPKCGKQLTIRLGKRG
RFIGCSGYPECDYTRDLNETAEQRAEAEAEAPQVIEGRVCPLDGGQLVVKSGRYGKFIGC
ANYPKCKHIEPLEKPKDTGVTCPQCKVGTLTERKSRYGKLFYSCNTYPKCTYATWNPPIA
ETCPQCKWPVLTLKTTKRRGLEKVCPQKECGYSVVVKTPEQLAAEGGGEG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaacctgctgatcgtcgagtcgccttccaaggcgaagacgctgaaaaaatac
ctgggcaaggatttcgagatcctcgcctcctacggtcacgtccgtggcctcgtgcgcaag
gacggctcggtcgacgtcgaccacgacttcgccatgaagtaccaggtgatcccgaagaac
gccaagcacgtcgacgccatcgtcagcgccgtgaaggccgccaagaacgtctacctggcg
actgacccggaccgcgaaggcgaggcgatctcctggcacctgctggagatcctcaagggc
aagaaggcgctcggcgagaagctggtcaagcgggtggtgttccacgagatcaccgagagc
gcggtcaaggccgcggtggcgcatccgcgcgacgtcgacagccacctggtcaacgcccag
caggcgcgcagcgcgctcgactacctggtcggcttcaacctgtcgccgctgctgtggcgc
aaggtgcgctcgggcctgtcggccggccgcgtgcagagcccggcgctgcggctgatctgc
gagcgcgagcgcgagatccgcgcattcacggcgcaggaatactggaccgtccatctcgac
agccacaagggcaagcagaagttcggcgcccggctcaacgagtggcgcggcaagaagctc
gaacagttcgacgtgccgaacgaggcgacccaggccgagatcctggccgccatcgagggc
cagccggccacggtgctcaacgtcgagaagaagcgcaagaaccgcaacccggccgcgccc
ttcaccacctcgaccatgcagcaggaggcggtgcgcaagctcggcatgaccaccgaccgc
accatgcgcaccgcgcagcagctgtacgagggcatcgcgctcggcgacggcaccaccggc
ctgatcacctatatgcgtaccgactcggtggcgctggccaacgaggcggtggcggagatc
cgcgaatacatcggcaacaccttcgacgccgaatcgctgccggccagcccgccggtctac
aagagcaaggccaagaacgcccaggaggcgcacgaggcgatccgcccgacctcgatcctg
cgcacgccggagtcggtcaaggccttcctcagcgccgagcagtacaagctgtacgagatg
atctggaagcgcacgctggcctcgcagatgtcggccgcgcgcttcgacaccaccggcgtc
gacatcggcgtcggcgaggcggtgttccgcgccagcggccaggtgctggtgttcgccggc
ttcctggcggtgtacgaggaggacgtcgacgacgccgaggacgaagacaacgccaagctg
ccgccgctcgaggcgggcgaggcggtgccggtcgacaagctctacggcgagcagcacttc
acccagccgccgccgcgttattccgaagccagcctggtgaaggcgctcgaagagttcggc
atcggccggccgtcgacctatgcctcgatcatctcgacgctgaaggatcgcgagtacgtg
atcctcgacaagaagcgcttcctgccgaccgacaccggcgaggtggtcaacaagttcctg
accgagcatttcgcccagtacgtcgattaccagttcacctccaagctcgaggacaagctc
gacgagatttccaacggcgagcgcgactggatcccggtgatggaggagttctggaagggc
ttctccgagcaggtcgaggagaagaaggcgctcaagcgcagcgaagtgacgcacgaggcg
ctcgacgaggcctgccccaagtgcggcaagcagctgaccatccggctcggcaagcgcggc
cgcttcatcggctgctcgggctaccccgagtgcgactacacccgcgacctgaacgagacc
gccgagcagcgcgccgaggccgaagcggaggcgccgcaggtgatcgagggccgggtctgc
ccgctcgacggcggccaactggtggtgaagtccggccgctacggcaagttcatcggctgc
gccaactaccccaagtgcaagcacatcgagcccttggagaagcccaaggacaccggcgtg
acctgcccgcaatgcaaggtcggcacgctgaccgagcgcaagtcgcgctacggcaagctg
ttctacagctgcaacacctatcccaagtgcacctacgcgacctggaacccgccgatcgcc
gagacctgcccgcagtgcaagtggccggtgctgacgctgaagaccaccaagcggcgtggc
ctggagaaggtctgcccgcagaaggagtgcggctacagcgtggtcgtcaagacccctgaa
caactcgccgccgagggcggcggcgagggctga
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