Chitinimonas koreensis: H9L41_02910
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Entry
H9L41_02910 CDS
T08620
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L41_02910 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cks03019
]
H9L41_02910 (pnp)
03016 Transfer RNA biogenesis [BR:
cks03016
]
H9L41_02910 (pnp)
Enzymes [BR:
cks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H9L41_02910 (pnp)
Messenger RNA biogenesis [BR:
cks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H9L41_02910 (pnp)
Transfer RNA biogenesis [BR:
cks03016
]
Prokaryotic type
tRNA degradation factors
H9L41_02910 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
KH_1
S1
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QNM97283
LinkDB
All DBs
Position
678375..680504
Genome browser
AA seq
709 aa
AA seq
DB search
MFNRISKSFAYGKHTVTLETGEIARQASGAVKVSMDDTVVLVTVVGAKKVKPGQDFFPLT
VDYQERTYAAGKIPGGFFKREGRPSEKEILTSRLIDRPIRPLFPEGFYNEIQIVATVMSV
DPEIDPDIPAMLGASAALAISGLPFQGPIGAARVGYIDGQYVLNPAASDLKRSQLDLVVA
GTEQAVLMVESEAQELPEAIMLGSVVFGHEQMQAAIQAINALADEVNPEVWDFQPPATDA
ELEAAIAAAGGEDIKLAFRIPQKQARTQKLNEAWAKVEAALISDDTDTLRANQIKDIFHA
MEAKIVRNQILDGYPRIDGRDTRTVRPIEIRTGVLPRTHGSVLFTRGETQAIVVATLGTK
MDEQTIDALMGEYSERFMLHYNFPPYSTGETGRVGSPKRREIGHGRLAKRALVAVLPKQE
DFSYSMRVVSEITESNGSSSMASVCGGCLSLMDAGVPLKDHVAGIAMGLIKEGNRFAVLT
DILGDEDHLGDMDFKVAGTENGVTALQMDIKINGITKEIMRVALDQAKEGRLHILGIMKG
ALGHAREEVSQHAPRLYTMKINPDKIRDVIGKGGSVIRALTEETGTQIDIGEDGTITIAS
VTSEGADEARRRIEQITAEVEIGKIYEGPVIKILDKNVGAIVQIMPGRDGLVHVSQIANE
RVNNVADYLKEGQIVRVKALEQDEKGRVRLSIKAVLNEEAAAAPASDAS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaatcgcatttccaaatcgtttgcctacggcaagcacaccgtgaccctcgagacc
ggcgaaatcgcccgtcaggcttccggcgccgtcaaggtgtccatggacgacaccgtggtg
ctggtcaccgtggtcggtgccaagaaggtcaagcccggccaggacttcttccccctgacc
gtcgactaccaggaacgtacctacgccgccggcaagatccccggcggcttcttcaagcgc
gaaggccgtccgagcgaaaaggaaatcctcacctcgcgcctgatcgaccgcccgatccgc
ccgctcttccccgaaggcttctacaacgagatccagatcgtcgcgaccgtgatgtcggtc
gatcccgagatcgatccggacatcccggccatgctcggcgcctcggccgcgctggccatc
tccggcctgccgttccagggcccgatcggtgccgcccgcgtcggctacatcgacggccag
tacgtgctgaacccggccgcttcggacctcaagcgctcgcagctggacctggtcgtggcc
ggtaccgagcaggccgtgctgatggtcgagtcggaagcccaggaactgcccgaagcgatc
atgctgggctcggtggtgttcggccacgagcagatgcaggccgccatccaggcgatcaac
gcgctggcagacgaagtgaaccccgaagtgtgggacttccagccgccggccaccgacgcc
gaactcgaagccgccatcgctgccgcaggcggcgaggacatcaagctcgccttccgcatc
ccgcagaagcaggcccgcacccagaagctcaacgaagcctgggccaaggtcgaagccgcg
ctgatctccgacgacaccgacacgctgcgcgccaaccagatcaaggacatcttccacgcg
atggaagccaagatcgtgcgcaaccagatcctcgacggctacccgcgcatcgacggccgc
gacacccgcaccgtgcgcccgatcgagatccgtaccggcgtgctgccgcgcacccacggc
tcggtgctgttcacccgcggcgagacgcaggccatcgtggtcgccacgctgggcaccaag
atggacgagcagaccatcgacgcgctgatgggcgagtactccgagcgcttcatgctgcac
tacaacttcccgccctactcgaccggcgaaaccggccgcgtcggctcgcccaagcgccgc
gagatcggccacggccgcctggccaagcgcgcgctggtcgccgtgctgcccaagcaggaa
gacttcagctactcgatgcgcgtggtgtcggaaattaccgaatcgaacggctcctcgtcg
atggcctcggtctgcggcggctgcctgtcgctgatggacgccggcgtgccgctgaaggac
cacgtggccggcatcgccatgggcctgatcaaggaaggcaaccgcttcgcggtgctgacc
gacatcctcggcgacgaagaccacctcggtgacatggacttcaaggtcgcgggtaccgag
aacggcgtgaccgcgctgcagatggacatcaagatcaacggcatcaccaaggaaatcatg
cgggtggcgctcgatcaggccaaggaaggccgcctgcacatcctcggcatcatgaagggc
gcgctgggccatgcccgtgaggaagtgtcgcagcacgcgccgcgcctctacacgatgaag
atcaatccggacaagatccgcgacgtgatcggcaagggcggctcggtgatccgtgcgctg
accgaggaaaccggcacccagatcgacatcggcgaagacggcaccatcaccatcgcttcg
gtgaccagcgaaggcgccgacgaagcccgtcgccgcatcgagcagatcaccgccgaagtc
gagatcggcaagatctacgaaggcccggtcatcaagatcctcgacaagaacgtcggcgcc
atcgtccagatcatgccgggccgcgacggcctggtgcacgtgagccagatcgccaacgag
cgcgtcaacaacgtggccgactacctcaaggaaggccagatcgtgcgcgtgaaggcgctc
gagcaggacgagaagggccgcgtccgcctgtcgatcaaggccgtgctgaacgaagaggcc
gctgcggcccctgcgtcggacgcctcctga
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