Chitinimonas koreensis: H9L41_04385
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Entry
H9L41_04385 CDS
T08620
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L41_04385 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_04385 (xth)
Enzymes [BR:
cks01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H9L41_04385 (xth)
DNA repair and recombination proteins [BR:
cks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H9L41_04385 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QNM97547
LinkDB
All DBs
Position
1044273..1045043
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AA seq
256 aa
AA seq
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MQIATWNVNSLKVRLPQVLDWLAARPELTVLALQETKLEDHAFPRAELEAAGLHVAFTGQ
KTYNGVALLSRLPLEDVQYNLPNFDDPQKRVIAATVGGVRVIGAYVVNGQALDSEKYPYK
LAWLDALIAYVKAELERHPRLALVGDYNIAPEDRDVHDPKAWEGNVLVSPPERERFRLLL
EAGLMDSFRLFEQEEKSFSWWDYRAAGFRRNAGLRIDHVLLSAPLAAACTACEIDREPRR
AERPSDHAPVVAVIAD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcgccacctggaacgtcaattcgctgaaagtccgcctgccgcaggtgctcgac
tggctcgccgcccggcccgagctcacggtgctggccctgcaggaaaccaagctcgaggat
catgcgttcccgcgcgccgagctcgaggcggccggcctgcacgtcgccttcaccggccag
aagacctacaacggcgtggcgctgctgtcgcgcctgccgctggaagacgtgcagtacaac
ctgcccaatttcgacgatccgcagaagcgggtgatcgccgccaccgtcggcggcgtgcgg
gtgatcggcgcctacgtggtcaacggccaggcgctcgattccgagaagtacccgtacaag
ctggcctggctcgacgcgctgatcgcctacgtcaaggccgagctcgaacgccatccgcgg
ctggccctggtcggcgactacaacatcgcgccggaagaccgcgatgtgcacgacccgaag
gcctgggagggcaacgtgctggtcagcccgcccgagcgcgagcgcttccggctgctgctc
gaggcggggctgatggacagcttccggctgttcgagcaggaagagaagagcttcagctgg
tgggactaccgcgccgccggcttccgccgcaatgccggcctgcgcatcgaccacgtgctg
ctgtcggcgccgctggcggccgcctgcaccgcctgcgagatcgaccgcgaaccgcgccgc
gccgagcggccgagcgatcatgcgccggtggtggcggtgattgcggattga
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