Chitinimonas koreensis: H9L41_06760
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Entry
H9L41_06760 CDS
T08620
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cks
Chitinimonas koreensis
Pathway
cks03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H9L41_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_06760
DNA repair and recombination proteins [BR:
cks03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H9L41_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QNM97953
LinkDB
All DBs
Position
1572534..1573493
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AA seq
319 aa
AA seq
DB search
MPRALWKGAISFGLIHIPVELFPAEKRSELDLDLLDKRDFAPVGYRRVNKRTGKEVGWDD
LVKGYQYEEGEYVALTEQELKQANPAATQTLDLLAFVPAADIDPLYYEQPYYLAPIRRGE
KVYALLRETLRRSGQVGIGQVVIRTRQHLAVLRAMDEVLLLQTLRYADEIRDRGDLDLPA
ADAKAAGLTARELQMAQALVEDMSSDWRPEQYRDRYRDDVLALVERKIAADETHLVASEE
TGGEPAPAGDNVIDLVALLKRSLGGKDKGKAGAGEESRRKPAAPRKRAAAKPAATAARKR
TTAAARTEPAAARKTAKSA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcgcattgtggaaaggcgccatcagcttcggcttgatccatatcccggtcgag
ctgttcccggccgagaaacgcagcgagctcgacctcgacctgctcgacaagcgcgacttc
gcgccggtcggctaccgccgcgtcaacaagcgcaccggcaaggaggtgggctgggacgac
ctggtcaagggctaccagtacgaggagggcgagtacgtggcgctgaccgagcaggagctg
aagcaggccaacccggcggcgacccagacgctggacctgctggccttcgtgccggccgcc
gacatcgacccgctctactacgagcagccctactacctggcgccgatccgccgcggcgag
aaggtctatgcgctgctgcgcgagacgctgcgccgcagcggccaggtcggcatcggccag
gtggtgatccgcacccgccagcacctggcggtgctgcgcgcgatggacgaggtcttgctg
ctgcagacgctgcgctacgccgacgagatccgcgaccgcggcgacctcgacctgccggcc
gccgacgccaaggcggccggcctgaccgcgcgcgagctgcagatggcccaggcgctggtc
gaggacatgagcagcgactggcggcccgagcagtaccgcgaccgctaccgcgacgacgtg
ctggcgctggtcgagcgcaagatcgccgccgacgagacccacctggtggcgagcgaggag
accgggggcgagccggcgccggccggcgacaacgtgatcgacctggtggcgctgctcaag
cgcagcctgggcggtaaggacaagggcaaggccggcgccggggaggaaagccgccgcaag
ccggccgcgccgcgcaagcgggccgccgccaagcctgcggcgacggccgcgcgcaagcgc
accaccgcggctgcgcggaccgagccggcggccgcgcgcaagaccgccaagtcggcctag
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