Chitinimonas koreensis: H9L41_07685
Help
Entry
H9L41_07685 CDS
T08620
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L41_07685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cks03019
]
H9L41_07685
Enzymes [BR:
cks01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
H9L41_07685
Messenger RNA biogenesis [BR:
cks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H9L41_07685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_22
HI1480
P-loop_SecA
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QNM98122
LinkDB
All DBs
Position
1761043..1762434
Genome browser
AA seq
463 aa
AA seq
DB search
MSFASLGLADEILRAVAELGYDQPTPIQLQAIPAVLTGRDLMAGAQTGTGKTAGFTLPIL
HRLSDKAVKGPSAGRPPVRALILTPTRELAAQVEESVQNYGKYLKLESMTMFGGVSINPQ
IKRLKSRVDILVATPGRLLDHVQQGTLDLSRVEILVLDEADRMLDMGFIRDIKKILALLP
KQRQNLLFSATFSDDIKALAEGLLHDPLLIEVARRNATADTIAQKVYPVDRERKRQLLAH
LIKENNWFQVLVFTRTKHGANRLAEQLDKDGISALAIHGNKSQGARTRALAEFKDGTLQV
LVATDIAARGIDIDQLPHVVNYELPNVPEDYVHRIGRTGRAGAEGEAVSLVCVDEKKLLA
DIEKVIKRELPREIVPGFEPDPSIKPEPIQQRSQGRQGQGQGRPGSGGGRQGQGRQGEPK
AGGQPRQPAGQDKQKQQARQPAAQAGNHNSRGQGARRPTGRHH
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgcttccctgggtctcgccgacgagatcctccgtgccgtggccgaactcggc
tacgaccagcccaccccgatccagctgcaggccatcccggccgtgctgaccggccgcgac
ctgatggccggcgcccagaccggcaccggcaagaccgccggcttcacgctgccgatcctg
caccgcctgtccgacaaggccgtcaagggcccgtccgccggccgcccgccggtgcgcgcg
ctgatcctgacgccgacccgcgagctcgccgcccaggtcgaggaatcggtgcagaactac
ggcaagtacctcaagctcgagtcgatgaccatgttcggcggcgtcagcatcaatccgcag
atcaagcgcctcaagagccgcgtcgacatcctggtggcgacgccgggccggctgctcgac
cacgtccagcagggcacgctcgacctgtcgcgcgtcgagatcctggtgctggacgaggcc
gaccgcatgctcgacatgggcttcatccgcgacatcaagaagatcctcgccctgctgccc
aagcagcggcagaacctgctgttctcggccaccttctcggacgacatcaaggcgctggcc
gaaggcctgctgcacgatccgctgctgatcgaagtggcgcgccgcaacgccacggccgac
accatcgcgcagaaggtctacccggtcgaccgcgagcgcaagcgccagctgctggcccac
ctgatcaaggaaaacaactggttccaggtgctggtgttcacccgcaccaagcacggcgcc
aaccggctggccgagcagctcgacaaggacggcatcagcgcgctggcgatccacggcaac
aagagccagggcgcgcgcacgcgggcgctggccgagttcaaggacggtacgctgcaggtg
ctggtggcgaccgacatcgccgcccgcggcatcgacatcgaccagctgccgcacgtggtg
aactacgagctgcccaacgtgccggaggattacgtccaccgcatcggccgcaccggccgc
gccggcgccgagggcgaggcggtgtcgctggtctgcgtcgacgagaagaagctgctggcc
gacatcgagaaggtgatcaagcgcgaactgccgcgcgagatcgtgcccggcttcgagccc
gatccgagcatcaagcccgagccgatccagcagcgctcgcagggccgccagggccagggc
cagggtcgtccgggcagcggcggcggtcgccagggccaaggccgtcagggcgagcccaag
gccggcggtcagccgcgccagccggccggccaggacaagcagaagcagcaggcccgccag
ccggccgcgcaggccggcaaccataacagccgtggccagggcgcgcgccgcccgaccggc
cgccaccactga
DBGET
integrated database retrieval system
