Chitinimonas koreensis: H9L41_08030
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Entry
H9L41_08030 CDS
T08620
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9L41_08030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cks03400
]
H9L41_08030
Enzymes [BR:
cks01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H9L41_08030
DNA repair and recombination proteins [BR:
cks03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9L41_08030
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QNM98181
LinkDB
All DBs
Position
complement(1838177..1839079)
Genome browser
AA seq
300 aa
AA seq
DB search
MSEARQELVLDELGLLPLWVRRDLVAAERARVAASNDAAASNDAAQPARAETAAAPAEAI
AMPAAAEPPPRPMRQTVIPASAPAPAPAAVAAASGSVERDQRAAAIAAMDWEQLQAAVAS
CTACSLCKSRNRTVFGVGNPEADWLIVGEAPGAEEDRLGEPFVGQAGKLLDSMLASVDLN
RRDGAFILNTLKCRPPQNRNPNPDELALCAPFLHRQVELIRPKVIFAVGRFAVQTLLGRE
ASIASLRGKRHDYRGVPVVVSYHPAYLLRNMPDKIKAWQDLLLARRMLATSANRQADTGS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcaagacaggagctcgtgctcgacgaactgggcctgctgccgctgtgggtg
cggcgcgatctggtcgcggccgagcgcgcccgcgtggccgcatcgaacgacgccgccgcc
tcgaacgatgccgcgcagccggcccgggccgaaaccgccgcggcgccggccgaagccatc
gcaatgcccgctgccgcggaaccgccgccgcggccgatgcgccagaccgtgatcccggcc
agcgcgcccgccccggcgccggccgcggtcgccgccgcgagcggcagcgtcgagcgcgac
cagcgcgcggccgccatcgcggcgatggactgggagcaactgcaggccgccgtggccagt
tgcaccgcctgcagcctgtgcaagtcgcgcaaccgcacggtgttcggcgtcggcaatccc
gaggccgactggctgatcgtcggcgaggcgcccggcgccgaggaggaccggctgggcgag
cccttcgtcggccaggccggcaagctgctcgacagcatgctggcctcggtcgacctgaac
cgccgcgacggcgccttcatcctcaacacgctcaagtgccggccgccacagaaccgcaat
ccgaatccggacgagctggcgctgtgcgcgcccttcctgcaccgccaggtcgaactgatc
cggcccaaggtgatcttcgcggtcggccgcttcgcggtgcagacgctgctcggccgcgag
gccagcatcgccagcctgcgcggcaagcgccacgactaccgcggcgtgccggtggtggtc
agctaccacccggcctatctgctgcgcaatatgcccgacaagatcaaggcctggcaggac
ctgctgctggcgcgccggatgctggccacctcggcgaaccgccaggccgataccggcagt
tga
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integrated database retrieval system
