Chitinimonas koreensis: H9L41_12680
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Entry
H9L41_12680 CDS
T08620
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
cks
Chitinimonas koreensis
Pathway
cks00541
Biosynthesis of various nucleotide sugars
cks01100
Metabolic pathways
cks01250
Biosynthesis of nucleotide sugars
Module
cks_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
H9L41_12680 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cks01005
]
H9L41_12680 (rfaD)
Enzymes [BR:
cks01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
H9L41_12680 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
cks01005
]
Core region
H9L41_12680 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
QNM94791
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All DBs
Position
complement(3032855..3033850)
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AA seq
331 aa
AA seq
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MFIVVTGAAGFIGSNLVKALNARGVSDIIAVDNLKKGDKFRNLVDCEIAHYIDKEDFIEQ
LDAGDFDGEIGAILHQGACSDTMEQDGRYMLDNNYQYSLALLDYCQIEEIPFIYASSASV
YGAGKVFREEREFEGPLNVYGYSKFLFDQIVRRRWDELTAQVVGLRYFNVYGARESHKGR
MASVAFHHFNQYRETGKVKLFAGCDGYGDGEQRRDFVSVEDVVRVNLHFLDHPKQSGIFN
LGTGRAQSFNELAAANVNACRRHEGKPALPLAELVAQGIIEYTPFPEALIGKYQSFTQAD
IGRLRETGYDAPFLTVEEGVDRYIDWLSRQG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcgtcgtcaccggcgcggccggcttcatcggatcgaatctcgtcaaggcgctc
aacgcgcgcggcgtcagcgacatcatcgcggtcgacaacctcaagaagggcgacaagttc
cgcaacctggtcgattgcgagatcgcgcactacatcgacaaggaagacttcatcgagcag
ctcgacgccggcgacttcgacggcgagatcggcgcgatcctgcaccagggcgcctgttcc
gacaccatggagcaggatggccgctacatgctcgacaacaactaccagtactcgctggcg
ctgctggactactgccagatcgaggaaatccccttcatctacgcctcgagcgcctcggtc
tacggcgccggcaaggtgttccgcgaggagcgcgagttcgaggggccgctcaacgtctac
ggctattccaagttcctgttcgaccagatcgtgcggcggcgctgggacgagctgaccgcc
caggtggtcggcctgcgctacttcaacgtctacggcgcgcgcgagagccacaagggccgc
atggcctcggtggccttccaccatttcaaccagtaccgcgagaccggcaaggtcaagctg
ttcgccggctgcgacggctatggcgacggcgagcagcggcgcgacttcgtgtcggtcgag
gacgtggtgcgggtcaacctgcacttcctcgatcatcccaagcagtcgggcatcttcaac
ctcggcaccggccgcgcccagagcttcaacgagctggccgccgccaacgtcaacgcctgc
cgccgccacgagggcaagccggcgctgccgctggccgagctggtggcgcagggcatcatc
gagtacacgcctttccccgaggcgctgatcggcaagtaccagagcttcacccaggccgac
atcggccggctgcgcgagaccggctacgacgcgccgttcctgacggtggaggagggcgtg
gatcgctatatcgattggctgagtcgccagggttga
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