Chitinimonas koreensis: H9L41_20475
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Entry
H9L41_20475 CDS
T08620
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cks
Chitinimonas koreensis
Pathway
cks03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H9L41_20475 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cks03019
]
H9L41_20475 (pcnB)
Enzymes [BR:
cks01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
H9L41_20475 (pcnB)
Messenger RNA biogenesis [BR:
cks03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
H9L41_20475 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QNM96158
LinkDB
All DBs
Position
complement(4840034..4841374)
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AA seq
446 aa
AA seq
DB search
MIRKLIGRVLKLKKRHGGGRVVIPAKRHGISRSQLPSFALKTTDRLQEAGFEAFIVGGAV
RDLLLGKHPKDFDVATNATPEDVHKVFRRSRIIGRRFRLVHVLYGEEVVEVSTFRGSGEA
LTDESGRIIRDNTWGSQEDDAKRRDFTVNALFYDPAREEIIDYHGGVEDIEKKRLAMIGA
PITRYREDPVRMLRAVRLAAKLGLAIESETRKPIRELAKLLENVPAARLFDEMLKLLFSG
QSWACLMQLRDEGLHHGFFPLLDKMMKAPHGEAFLRTALENTDRRIREDKPVSAGYVFAA
LLWLEVLDNWDKRKAAGEKPMLALFSAIDEVEAVQEEKLAIPRRYGTAMKEIWTLQPRFE
QRSGIKPFRLLEHPRFRAGYDFLCLRASVGECEQELADWWTAFQDADSQAREAMLLRPQA
GDATKKRRRRRSGAKQGDASAADDGQ
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcaaactgatcggccgcgtgctcaagctcaagaagcgccacggcggcggccgc
gtggtgatcccggccaagcgtcacggcatcagccgctcgcaactgccttccttcgcgctc
aagaccaccgaccgcctgcaggaggccggtttcgaggccttcatcgtcggcggcgcggtg
cgcgacctcttgctcggcaagcatcccaaggacttcgacgtggccaccaacgccacgccc
gaggacgtgcacaaggtgttccgccgctcgcgcatcatcggccggcgcttccgcctggtc
cacgtgctgtacggcgaggaagtggtcgaggtgtcgaccttccgcggctcgggcgaggcg
ctgaccgacgagtcgggccgcatcatccgcgacaacacctggggcagccaggaagacgac
gccaagcggcgcgacttcaccgtcaacgcgctgttctacgacccggcgcgcgaagagatc
atcgactatcacggcggcgtcgaggacatcgagaagaagcgcctggcgatgatcggcgcg
ccgatcacccgctaccgcgaagacccggtgcgcatgctgcgcgcggtgcggctggcggcc
aagctcggcctcgccatcgagagcgagacgcgcaagccgatccgcgagctggccaagctg
ctcgagaacgtgccggccgcgcggctgttcgacgagatgctcaagctgctgttcagcggc
cagagctgggcctgcctgatgcagctgcgcgacgagggcctgcaccacggcttcttcccg
ctcttggacaagatgatgaaggcgccgcacggcgaggccttcctgcgtaccgcgctggag
aacaccgaccgccgcatccgcgaggacaagccggtctcggccggctacgtgttcgccgcg
ctgctgtggctcgaggtgctcgacaactgggacaagcgcaaggcggccggcgagaagccg
atgctggcgctgttctcggcgatcgacgaggtcgaggcggtgcaggaggagaagctcgcc
atcccgcgccgctacggcaccgcgatgaaggaaatctggaccctgcagccgcgcttcgag
cagcgcagcgggatcaagccgttccgcctgctcgagcatccgcgcttccgcgccggctac
gacttcctctgcctgcgcgccagcgtgggcgaatgcgagcaggagctggccgactggtgg
accgccttccaggatgccgacagccaggcgcgcgaagcgatgctgctgcggccgcaggcc
ggcgacgccaccaagaagcgccgccgtcgccgcagcggcgccaagcagggcgacgcgtcc
gcggcggacgacggccagtga
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