Corynebacterium kutscheri: UL82_03460
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Entry
UL82_03460 CDS
T03866
Symbol
rne
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
cku
Corynebacterium kutscheri
Pathway
cku03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cku00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UL82_03460 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cku03019
]
UL82_03460 (rne)
03009 Ribosome biogenesis [BR:
cku03009
]
UL82_03460 (rne)
Enzymes [BR:
cku01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
UL82_03460 (rne)
Messenger RNA biogenesis [BR:
cku03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UL82_03460 (rne)
Ribosome biogenesis [BR:
cku03009
]
Prokaryotic type
rRNA processing factors
UL82_03460 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
GMP_synt_C
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
AKE40901
UniProt:
A0A0F6TD66
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All DBs
Position
732499..735423
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AA seq
974 aa
AA seq
DB search
MATVDYTKIREDIGEKTRVHIFAKQLGISSRELMLILDEIGIVRVPQSNLRKDEALAALN
KLEQQLNDAQPEQNTVKKVEKSAKTSPKKTKKKVVAAKAVATANGDTQEVAEVDKKLRHR
VEKNVENEINQIERKVDREVVGTLVEKEIHEIEEEVDTELAGRISSQPEPTSAPLIVAPS
YDSIFKAPVILDEDAVDDDIISDFSEDDKEVADIKKKRRGRRGTGRGRGITSREDDGDSF
SEDNEEEELISEPRAIRGSTRLEAQRRRRQEMREEQQKKRHIVSEAEFLARRESVTRTMV
VRERERYDHPGVVTQVGVLEDDMLVEHFVTSDSQSSMVGNIYLGRVQNVLPSMEAAFIDI
GRGRNAVLYAGEVNWHSHGLGGRNRKIEQALKSGEQVLVQVSKDPLGHKGARLTTQISLA
GRYLVYVPGGRSAGISRKLPAPERHRLKGILKRVVPSNGGVIIRTAAEGVSEQAIAADVN
RLHNLWEQIQQRTVEANAAKGAKPETLYEEPNMLVKVIRDLFNEDFSSLIVDGERAWNTV
HAYISSVAPDLVDRLEHFDREKHKGKDAFEVYRVDEQLQKALSRKVWLPSGGTLVIDRTE
AMTVIDVNTGKFTGAGGNLEETVTKNNLEAAEEIVRQMRLRDLGGMIVVDFIDMVLPENQ
DLVLRRLKEALGRDRTRHQISEVTSLGLVQITRKRLGTGLLETFATECEHCEGRGVIIHD
DPIEQHDPEAKARKRGVRHQVPTEHPVAIARKTRERSLEDLAASVVLQENSVLEESEEPK
ETSAFVAEKEAEDTPSRSDSSKTRSRRRSHRVNRNKEAMSDSTDIAAMTDIVDSAVERAE
QQDPDDISFAQTYDEAIAEFEASPRRKRKVRGNSASDHRPEKADFEIQSKPSIEDVAQHS
GEQEENDTSDTIADAPKVSATRRRRRRAVRVAEHAKINKQTQVSHDSSRSSVTKENVSGS
RASKRRRRVVRRRG
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
gtggctacggttgattacacaaagattcgggaagatattggagaaaaaacccgagtccat
atttttgctaagcaattaggcatttcttcacgcgaacttatgctcattctcgacgagatc
ggcattgttcgcgtgcctcagtctaatctgcgaaaagatgaagcacttgcagcactgaat
aagcttgaacagcaattaaatgatgcccaacctgagcaaaatacagttaaaaaagtagaa
aagtcggctaaaactagccctaaaaagactaagaaaaaagtagtagcggctaaagcggtt
gctactgctaatggcgatacccaagaggtggcagaagtagacaaaaaactacgccaccgg
gtagaaaaaaatgtcgaaaatgagatcaatcagatcgaaagaaaagtagatcgagaagtt
gttggcactttagtggaaaaagagatccacgagattgaagaagaagtagataccgaactt
gccggacgtatttctagtcagccggaaccaacaagtgcaccacttatcgttgccccaagc
tacgattctatttttaaagctccagttattctcgacgaagatgcagttgatgatgacatc
ataagtgatttctctgaagacgataaagaagttgctgacattaaaaagaagcgacgcgga
cgtcgtggtaccggccgtgggcgaggcataactagccgcgaggatgatggcgatagtttt
agcgaagataatgaggaagaagaactcatttctgagccacgggcaattagaggatctacc
cgtttagaagcacaacgtcgtcgccgccaagaaatgcgcgaggaacagcaaaagaaacgt
catattgtttctgaagcagagtttttggcgcgccgggaatcagtaactcgtaccatggtt
gtgcgcgagcgggagcgttatgatcacccaggtgtggtcactcaggtgggcgtacttgaa
gacgatatgcttgttgaacactttgttacctctgattcgcagtcgtcgatggtaggcaat
atctatcttggacgggtacaaaatgtgctaccaagcatggaagcggcctttattgatatt
ggacgtggtcgcaatgcggtactttatgctggtgaagttaattggcacagccatggctta
gggggacgcaaccgaaaaattgagcaagctttaaaatctggcgagcaagttttggttcag
gtttctaaagatccacttggccataaaggagcacgtttaacgacgcaaatctctctggct
ggtcggtacctggtttatgttcctggtgggcgttcggctggaatttctcgtaaacttcct
gccccagaacgtcaccgactgaagggcatcctgaaacgagtagtccctagtaatgggggc
gttattattcgcactgctgcggaaggagtctctgagcaggctatcgcagctgatgtgaat
cgactacacaacctctgggaacaaattcagcagcgtactgtagaagctaatgcagctaaa
ggcgctaagccagagacactgtatgaagaaccaaatatgctggtgaaagttattcgcgat
ctttttaatgaagatttttcttctttgatcgttgatggcgagcgagcatggaataccgtg
cacgcttatattagttctgttgctccagacctagttgatcgtctagaacactttgaccga
gaaaagcataagggtaaagatgctttcgaggtatatcgagttgatgagcaactgcaaaaa
gcactatcacgtaaagtttggttaccctctggtggcaccttggtgattgatcgcactgag
gccatgacagttattgatgtcaacacaggtaaattcaccggtgccggcggcaatctggaa
gaaaccgttactaagaataacttggaagcggcagaagaaattgttcgtcaaatgcgttta
cgtgatcttggcggcatgattgttgttgactttattgacatggtgttaccagaaaatcaa
gatctggtcctgcgtcgattaaaggaagccttaggacgcgatcgtacccggcatcaaata
tctgaagtgaccagtctcggtttggtgcaaataacccgtaagcggctgggcactggttta
ttggagacattcgccactgaatgcgagcattgcgagggtaggggagtcattattcacgat
gaccctattgaacagcatgatccagaggcaaaggcacgtaaacgtggagtacggcatcaa
gtaccaactgagcatccagtagcgatagctagaaaaactcgtgagcgtagcctagaagat
cttgctgcatctgtggtgctgcaagagaattcggttctggaagaatccgaagaaccgaaa
gagacttctgctttcgtagcagaaaaggaagcagaagataccccgtcgcgctcggatagt
tcaaaaacccgatcacgtcgccgctcgcatcgagtgaatcgaaacaaagaagctatgtct
gattcaacagatattgctgcaatgaccgatattgttgatagcgcagtagaacgtgctgag
caacaagatccggatgatatttcttttgctcagacttatgatgaagcaattgcggagttt
gaggcttcgccgcgtcgtaagcgaaaggtacgcggaaattcagcttcggatcaccgtcca
gaaaaagctgattttgagattcaatcaaaaccgtcgatagaagatgtcgcacagcatagt
ggcgagcaagaagaaaatgatacatctgataccattgctgatgcaccgaaagtgagtgca
acacgacgcagacggcgtcgagctgtacgtgttgctgaacatgcaaaaataaataagcaa
acccaggtttctcatgattcttcccgttcgtctgttacaaaagagaacgtaagtggttca
cgagcttctaaacggcggcgccgtgttgttcggagacggggttaa
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