Corynebacterium kalinowskii: CKALI_03005
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Entry
CKALI_03005 CDS
T07849
Symbol
rng
Name
(GenBank) Ribonuclease G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
ckw
Corynebacterium kalinowskii
Pathway
ckw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKALI_03005 (rng)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ckw03019
]
CKALI_03005 (rng)
03009 Ribosome biogenesis [BR:
ckw03009
]
CKALI_03005 (rng)
Enzymes [BR:
ckw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CKALI_03005 (rng)
Messenger RNA biogenesis [BR:
ckw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CKALI_03005 (rng)
Ribosome biogenesis [BR:
ckw03009
]
Prokaryotic type
rRNA processing factors
CKALI_03005 (rng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QGU01484
UniProt:
A0A6B8VJ35
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All DBs
Position
625863..628499
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AA seq
878 aa
AA seq
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MANGAAQFDRTQLGEKVRVHLLAKEIGLTSKELIEELKQIGLKKVAQSTLTKAEAEQVLD
ALAGPEDKPQEVDEAIRKRVEKNVANEIHQIEEKVDRELAVIDLTPEEELLEDIEPAITP
APENIFIPPIFKAPEPVVATPREEDEEESATPKRRGRRGKGRGRGVEEAQPEVQEEVTEE
PVGIKGSTRLEAQRRRRTELREEGRKKRHVVSEAEFLARRESVERVMVVREREREDGLGR
VTQVGVLEDSMLVEHFVTSDTQSTMVGNIYLGRVQNVLPSMEAAFIDIGKGRNGVLYAGE
VDWRSAGLGGRSRKIEQALKSGDQVLVQVTKDPVGHKGARLTTQISLAGRFLVYVPGGRS
AGISRKLPEPERKRLKEILKEVVPGDGGAIIRTAAEGVHEREIGADVHRLHSLWEQIQER
TAKEKSTRGAKPVTMYEEPDMLVKVVRDLFNEDFDKLVVDGARPWNTVSAYVNSVAPDLT
ERLEKYESYDHGGIDAFEFYRIDEQLHKALARKVWLPSGGTLVIDRTEAMTVIDVNTGKF
TGAGGNLEETVTKNNLEAAEEIVRQMRLRDMGGMIVIDFIDMVLPENQDLVLRRLTETLG
RDRTRHQVSEVTSLGLVQVTRKKLGTGLLETFSTECECCQGRGIILHTDPIDQDEDRPIY
GKKAAKAAEKKREPKEHPAIKALHREDAHEEEHEESPSIEELAAAVVSVEPDEDSAVSEI
EKIAAAAVEVADEQDPEEPSGASYEQALEEFNNSPRRRRATRGNSKSDFPPRKADFAPEP
KPEPAPESAPAPESKPDVAPEAVSETGAPRRGRRRVVKRVAARVEETPAADKAEQQEKAE
RPQRSRRRVVKKVAEEPAESQQPQQSQGRRRAVRRNRG
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaacggcgcagcacaatttgatagaacccaattgggtgagaaggtccgggttcac
ctgttggccaaggaaatcggcctgacttctaaagagctcatcgaggagctgaagcagatc
ggtttgaaaaaggtcgcgcaatcgacgctgaccaaggccgaggcagagcaggtgctggat
gcgctcgcagggccggaggacaagcctcaagaggttgatgaggcgatccgcaagcgcgtg
gaaaagaacgtggcaaatgagattcatcagatcgaggagaaggtagatcgcgagctcgca
gtcatcgacttaacccccgaggaagagctgctcgaggacatcgaacctgcgattacccct
gcaccagaaaacattttcattccgccaatctttaaggcaccagaacctgtagtcgcgacg
cctcgagaagaagatgaagaggagtctgccacgccgaagcgtcgtggacgtcgtggcaag
ggccgtggccgtggggtcgaggaagcccagcctgaggtgcaggaagaagtcaccgaggag
ccagtaggcatcaagggttccacgcgcttggaggcgcagcgtcgtcgtcgcactgagctg
cgtgaagagggacgcaaaaagcgtcatgtcgtctccgaggcagaattcctggctcgtcgt
gagtccgtcgaacgcgtcatggtcgtgcgggaacgcgagcgcgaagacggtctcggtcgt
gtgacccaggtgggtgtgctggaagattccatgctcgtcgagcactttgtcacctcagac
acccagtccacgatggtcggcaacatctacctcggtcgcgtgcaaaacgtgctgccttct
atggaggccgcgttcatcgacatcggaaagggacgcaatggcgtcctctacgccggtgaa
gtcgactggcgcagcgccggtctgggtggacgttcccgcaagatcgaacaggcactcaag
tcaggcgaccaggttctggtgcaggtcacgaaggatccggtcgggcataagggcgctcgc
ctcacgacgcaaatttccctggcgggtcgcttcctggtgtacgtacctggcgggcgcagc
gcaggtatctctcgcaagttgcctgagccggagcgcaagcgtctcaaggaaatcctgaag
gaagttgtcccaggcgatggcggtgcgatcatccgcaccgctgcggaaggcgtccacgag
cgcgaaattggcgctgacgtccatcgcttgcactccctgtgggaacagatccaggagcgc
accgcaaaggaaaagtccactcgtggcgccaagcctgtcaccatgtatgaagagccggac
atgctggtcaaggtggttcgggacttgttcaatgaagactttgacaagctcgttgtcgac
ggcgcccgtccgtggaacaccgtatccgcatatgtgaattcggtggcaccagacctcacg
gaacgactcgaaaagtatgagtcctacgaccatggcggtatcgacgcctttgagttctac
cgcattgatgagcagctgcataaggccctggctcgtaaggtgtggctgccatcaggtggc
accctcgttattgaccgcaccgaggccatgaccgtcatcgacgtcaacaccggcaagttc
accggtgccggtggcaacctcgaagagaccgtcaccaagaacaacttggaagctgcggaa
gagatcgttcgccagatgcgcctgcgcgacatgggcgggatgatcgtcattgacttcatc
gacatggtgctaccggagaaccaggacctagttttgcgtcgtcttaccgaaacgctgggt
cgcgaccgcactcgccaccaggtttccgaagtgacatcgctcggccttgtccaggtcacc
cgtaagaagttgggcactggtctgctcgagactttctctaccgagtgtgagtgctgccag
gggcgtggcatcatcctgcacaccgatccgattgatcaggacgaggaccgtccgatctac
ggaaagaaggcagccaaggctgctgaaaagaagcgcgaacctaaggaacacccagctatc
aaggccttgcaccgcgaggatgctcatgaagaagagcacgaggaatcgccatcgatcgag
gagctggccgcagcagtcgtttcggtagaaccggacgaggactcggccgtctccgagatc
gagaagatcgcggcggcagcagtagaggtcgctgacgagcaggatccagaggaaccatca
ggtgcctcctacgagcaggcgctggaagagttcaacaactcgccacgccgtcgtcgcgca
acccggggcaactccaagtcggacttcccgccacgtaaggcagacttcgcgccagaacca
aaaccggagccagcgccagagtcggcacctgcgcctgagtcaaagcctgacgttgcgcct
gaggctgtgtcagagactggcgcgcctcgccggggacgtcgccgagtagtcaagcgcgtt
gctgctagggtggaggaaactccggccgccgataaggcggagcagcaggaaaaggcggag
aggccacagcgctcgcgccgtcgcgtggtgaagaaggtggcggaagagccagctgaatcc
cagcagccacagcagtctcagggtcgtcgacgcgctgttcgccgtaaccgaggctag
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