Corynebacterium kalinowskii: CKALI_04480
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Entry
CKALI_04480 CDS
T07849
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
ckw
Corynebacterium kalinowskii
Pathway
ckw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CKALI_04480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckw03021
]
CKALI_04480
03019 Messenger RNA biogenesis [BR:
ckw03019
]
CKALI_04480
Transcription machinery [BR:
ckw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CKALI_04480
Messenger RNA biogenesis [BR:
ckw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CKALI_04480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
HeH
Motif
Other DBs
NCBI-ProteinID:
QGU01774
UniProt:
A0A6B8VJX4
LinkDB
All DBs
Position
949592..951571
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AA seq
659 aa
AA seq
DB search
MTQADSAAQNDGAPINLVALRMPELRKIAEERGIRGISGLRKSELIAAIQSGGKSAPANS
APAKQEPAPAPAPEVAETAEVSETRAPRRRRAAVKTSEAAASEPQQAAVATEDSAQENSE
ESGNQNENKYESRSAARRARRNRARSAQRDDNHREDHQREDTPREESQGDQASDNERHEA
NESQRSHESKSEPRRDNRSDDQDRSDSQSEGNHGEGNSDRGDRGDRGDRRGRRNRRERGR
GRRDRDNREPRDSRDSRDNNDEIREDDVLQPVGGILDIVDNNVSFVRTTGYQAGPADVFV
TQQMIRKFGLRRGDAITGQVKMPRDGQGHQGGNRGRQKYNALVRVDSVNGKPVEEARNRP
DFAKLTPLYPNQRLRLETDPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANA
IATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPGEHTAVAELAIERAKRLV
EQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLT
IIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLVP
EEARIMHKLRRILSALDNQQAIDLLIKQLKKTKSNGEFLMQVASSAPMAADASDEEEYS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
gtgactcaagcagacagcgccgcacaaaacgacggcgctcccatcaatctcgtcgcactc
cgtatgccagaacttcgtaagatcgcagaagaacgaggcattcgagggatctccggattg
cgaaagtcggaactgatcgccgccattcaatcaggtggcaagtccgcaccagctaactca
gctccagcgaagcaggagccagcacctgcaccggcaccagaagtagccgaaaccgccgag
gtctctgagacccgcgctccgcgtcgtcgtcgcgcagctgtcaagacctctgaggccgca
gcgtctgagccacagcaggccgcagtagcaacggaagattctgcacaggaaaactccgag
gaatccggcaaccagaacgagaacaagtatgagtctcgctctgctgcacgtcgcgcacgt
cgcaaccgcgcccgttcagctcagcgtgatgacaaccatcgtgaggaccaccagcgcgag
gacacgccacgcgaggagtctcagggcgatcaggcgtcagacaacgagcgccacgaggcc
aatgagtcccagcgctctcacgagtcgaagtctgagccaaggcgcgacaataggtctgac
gaccaggatcgttctgactcccagagcgaggggaaccacggcgaaggtaactccgaccgc
ggcgatcggggagatcgtggcgaccgtcgtggccgtcgcaaccgtcgtgagcgtggccgt
ggccgccgtgaccgcgacaaccgcgaaccacgcgattctcgcgattctcgcgacaacaac
gatgaaatccgcgaagacgacgttttgcagccggtaggcggcatcctcgacattgtggac
aacaacgtctccttcgttcgcacgaccggctaccaggctggccctgccgacgtttttgtc
acccagcagatgatccgcaagttcggcctgcgtcgcggcgacgctatcactggccaggtg
aaaatgcctcgtgatggccagggccaccagggaggcaaccgtggccgccagaagtacaac
gccctcgtgcgcgtggattccgtcaacggaaagcctgtggaagaagctcgcaatcgtccc
gattttgccaagctgactccgctgtacccgaaccagcgcctgcgcctagaaacggatcca
aagatcctgaccacccgtgtgatcgacctgatcatgccgattggtaagggccagcgcgcc
ctgatcgtctccccgcctaaggccggtaagaccacgatcctgcagaacattgccaacgcg
atcgctaccaacaaccctgagtgctacctcatggtcgtcctggtagatgagcgtccggaa
gaagtcacggacatgcagcgcagcgtgaagggtgaagtcattgcttctaccttcgaccgc
ccaccaggagagcacaccgcggtggcggaactcgccatcgagcgtgcaaagcgcctggta
gagcaggggcaggatgttgtcgtgttgcttgactccatcacccgtctgggccgtgcctac
aacaacagctccccagcatccggtcgtatcctgtccggcggtgtggactccaacgcgctc
tacccaccaaagcgcttcctcggtgctgcccgcaacatcgaaaacggtggctccctgacg
atcattgccaccgctatggtcgagactggctccgccggcgataccgtgatcttcgaagag
ttcaagggcaccggcaatgccgagctcaagctggaccgtaagatctccgagcgtcgcgtc
ttcccagccgtggatgttaatccatctggcacccgtaaggacgagctgctcctggttcca
gaagaagcccgcattatgcacaagctgcgtcgcatcctctctgcgctggataaccagcag
gcgatcgacttgctgatcaagcagctgaagaagacgaagtccaacggcgaattcctcatg
caggttgcgtcctcggctccgatggcagcagatgctagcgatgaggaggaatactcctaa
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