Corynebacterium kalinowskii: CKALI_06570
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Entry
CKALI_06570 CDS
T07849
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ckw
Corynebacterium kalinowskii
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ckw03016
]
CKALI_06570 (rnd)
Enzymes [BR:
ckw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CKALI_06570 (rnd)
Transfer RNA biogenesis [BR:
ckw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CKALI_06570 (rnd)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QGU02176
UniProt:
A0A6B8VTT3
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Position
1376173..1377372
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AA seq
399 aa
AA seq
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MNAPLLLEPRDGLPAVAHTPEEFIAAARALDAGRGPFAIDTERASDYRFDDRAFLIQIRR
RDSGTFLIAPEGHRPECRAALAPVLNGQEWVLHAAASDLPALYQLGLKPGLIFDTEVSGR
LLGLPKVNLAALTEDVLGVALEKQHGNEDWSTWPLPESWINYAALDVELLLELAEALTEL
LDAAGKLSWLVQECAHIAATAAPADPTWRDLKGVGKLHTSEQLLIAKTLWERRQAVGRER
DQAPHKILANKAIIALATSLPTSREGVRSSIGRRASSGLVSRISVAMNRVRTSPKETWPQ
PTRRDYNLAPAPRSMWSSSFPDAQAALEAARMHLAELAEATHTPQENLIQPAILREIIWA
SVVTRKVTTSAQLRDYMATVGVRPWQQELTAPLLAEILI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgcgccgctgctgctcgagcctcgcgacggcctgccagcggtcgcccacacccct
gaagaattcatagctgccgcacgcgcgcttgatgccggccgcggcccctttgccatcgac
accgagcgcgcatccgactaccgctttgatgaccgcgcctttctgattcagatcagacga
cgcgactctggcacttttctcatcgcacctgaaggccaccgccccgagtgccgagcagcc
ctcgcaccagtactcaatggtcaggaatgggtgttgcacgcggcggccagcgacctacct
gcactgtaccaactcggtctgaaacctggcctgatttttgacaccgaagtcagcggtcgg
ctgctcgggctccccaaggtcaacctggcagccctcaccgaagatgtgctcggggttgcc
ctagaaaagcaacacggcaacgaagactggtccacttggcccctgcccgaatcctggatc
aattacgctgccttggacgtagagctgctgctcgagctcgccgaggcgctcactgagctt
ctcgacgccgctggcaaactctcctggctcgtgcaagaatgcgcccacatcgcagccact
gcggccccggctgatccaacgtggcgtgatctcaagggggtcggaaagctgcacacctcg
gaacagttgctcatcgccaagacattgtgggagcgccgtcaagcagtggggcgtgagcga
gaccaagcgccacataagattctcgccaataaggcgatcattgcccttgccacctcctta
cccacctccagggaaggtgtgcgttcatcgatcgggcgtcgtgcgagttcgggcttggtg
tcgcgtatttccgtggcaatgaaccgcgttcgcactagtccgaaagagacgtggccacag
cctacgcggcgcgactacaacctagcgcctgccccacgttccatgtggagctccagcttc
ccggacgcacaggcagcgttggaggccgctcgaatgcatctcgcagagctcgcagaggca
acccacacccctcaggagaacttgatccaaccggctatcttgcgggagatcatttgggca
agcgtggtaacgcgaaaagtgaccacgagcgcgcagttgcgcgactacatggccaccgtt
ggagtgcgtccttggcagcaggagctcaccgctcccctgctagccgagatccttatttag
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