Corynebacterium kalinowskii: CKALI_07275
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Entry
CKALI_07275 CDS
T07849
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ckw
Corynebacterium kalinowskii
Pathway
ckw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CKALI_07275 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ckw03400
]
CKALI_07275 (fpg1)
Enzymes [BR:
ckw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CKALI_07275 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CKALI_07275 (fpg1)
DNA repair and recombination proteins [BR:
ckw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CKALI_07275 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_Ribbon_TF
Zn_ribbon_Com
NFACT_N
DUF7340
Motif
Other DBs
NCBI-ProteinID:
QGU02317
UniProt:
A0A6B8VRR8
LinkDB
All DBs
Position
complement(1527482..1528312)
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVEVVRRGLAAHVVGKRFATAEVLHPRVARRQPGGAAEIEARMAGALVEGIDRRG
KYLWLDTSQGALLVHLGMSGQMLIKDSSAEPHKHLRARAVLDDGHEVWFVDQRTFGYWHV
GELVDGVPELVSHVASDLLDPALDLGFLGERIRSRRSAIKRVLLDQTVVSGIGNIYADEM
LWQARIHGERLASSLSASEVAELLTSGIEVMQRALSQGGTSFDALYVNVNGESGYFSRSL
NAYGQLGRPCPRCGTLIVRQQFANRGSHFCPRCQAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgccagaagtcgaggtggtgcgacgtgggttggccgcccatgtcgtcggc
aagcgctttgcgacggcggaggttttgcatccacgcgttgcacgccgccagcccggtggc
gctgccgaaattgaggctcgcatggcaggtgccctcgtcgagggcattgaccgccggggc
aagtatctatggcttgatacgtcgcagggggcgctgctcgtccaccttggcatgagtggg
cagatgctcatcaaagattcttccgccgagcctcacaagcacctccgggcgcgcgcagtt
ctcgacgacggccacgaagtttggttcgtggaccagcgcaccttcgggtactggcacgtc
ggggagctagtcgatggggttcctgaactagtgtcccatgtcgcttccgatctcttagat
cctgcgctggacctgggctttttgggtgagcggatccgttcgcgacgctcagcaattaag
cgggtgctgcttgatcaaaccgtagtgtccgggatcggcaacatttacgcagacgagatg
ctgtggcaggcgaggatccatggggagcgccttgcttcttctctttcggcttctgaggtc
gctgaattgttgacctccggtattgaagtgatgcaacgggccctgtcccagggcggaact
tcttttgacgcgctgtacgtgaatgtcaatggagaatctggttatttttctcggtcgctg
aatgcttacggacagctaggacggccgtgcccgcgctgcggcacgctcatcgttcggcag
caatttgcgaaccgcggatcgcacttttgtccgcggtgtcaggccttgtag
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