KEGG   Corynebacterium kalinowskii: CKALI_08585
Entry
CKALI_08585       CDS       T07849                                 
Name
(GenBank) putative ATP-dependent helicase Lhr
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ckw  Corynebacterium kalinowskii
Brite
KEGG Orthology (KO) [BR:ckw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ckw03400]
    CKALI_08585
Enzymes [BR:ckw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CKALI_08585
    5.6.2.6  RNA 3'-5' helicase
     CKALI_08585
DNA repair and recombination proteins [BR:ckw03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CKALI_08585
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD WH4_Lhr WH3_Lhr WH2_Lhr Helicase_C ResIII AlkZ-like DUF6406 AAA_25 PhoH
Other DBs
NCBI-ProteinID: QGU02577
UniProt: A0A6B8VSG5
LinkDB
Position
complement(1785300..1790042)
AA seq 1580 aa
MTTNILDRFRPHVRTWFTDVFAAPTPVQEQAWEEISAGSHALVVAPTGSGKTLAAFLWAI
NSLVDQPEQPALPALIDAPLRPTRRGGKVKVLYISPLKALGVDVENNLRAPLLGISRVAA
RLEMAEPEVTVGVRSGDTPASERNRQLRTPPDILITTPESLYLMLTSKAAAILDEVHTVI
IDEIHAMAGTKRGVHLSLTLERLAEVAGDFQRIGLSATVRPLERVAAFLGGDRPVSLIAP
QSEKRWQLDVHVPVDDLSDLPTPDQGSPIGEAVLDDPHGFGGPTPAQESALPQQKSIWPF
IEQELYQEIMAAQSTLVFVNSRRSAERLTSRLNELYAIEHDPAALSPELRRDPAQLMKSV
DVAGKAPAIIARAHHGSVSKEERAQTEAALKAGELKCVVATSSLELGIDMGAVDLVVQVE
SPPSVASGLQRVGRAGHSVGAVSQGSFYPKHRADLVQSAVTVQRMRQGLIEELKVPQNAL
DVLLQQTVAAASISDVHVDTWYECVRRAYPYRDLPRDVFDAVIDLASGVYPSTDFAELKP
RVVFDRTTGTLQGRPGAQRVAVTSGGTIPDRGMFGVFLVGSEGAPRRVGELDEEMVYESR
VGDVFTLGATSWRIEDITRDQVLVSPAPGHTGRLPFWTGDQAGRPAELGRAVGAFRREVH
ANPGVATDLDERARNNLIAFLNEQEEATGIIPDEQTLVLERFRDELGDWRVVLHSPFGRG
VNAAWALAVGARISETTGMDAQAVAGDDGIILRLPESDREPSADLFVFDADEIRDIVTEQ
VGNSALFASRFRECAARGLLLPRRNPGKRAPLWQQRQRAAQLLDVARKYPSFPIILETVR
ECLQDVYDLPELTQVQKDLGLRRIRIAEVTTEQPSPFASSLLFNYTGAFMYEGDSPLAEK
RAAALALDPSLLAKLLGTVELRELLDQDVIAEIHAQLQRTTPDRRARTAEELADTLRLIG
PIPVSDLENHTDVSLGAALDQLAGRVMVVRIAGRDHLAQSLDAPLLRDALGIPVPAGVSA
QATVITDALAQLVNRYARSRGPFTVAELAEVFGLGHSTALAAIQGALSQKVLVEGHFRAG
VEAMEYCAVEVLRRIRSLSLARARAEAEPVSTSAFARFLPEWLGVAPIGESPKLHGADGV
FQVLEQLAGVRLPASAWEALILPSRISDYHQGMLDELTASGEIRILGAGVAAAKDPWIML
LPADYAAELAPEQHDAALSPLQEQVVEVLGKGGGFYFADLLAELDVPALEIRDALWSLVD
AGLVTPDSFGAIRARLSGTSVKGAAHRASRRPTRGRLRMGRTSFAQSQQQGTPPDMLGRW
SLAVTPSTDTTSRSVAHGEAWLDRYGVVTRGSIVAEDVLGGFALAYKVLSRFEENGKALR
GYLIEGLGAAQFSTPSIVDRLRGLADSPDLSGWPSGADDPHCYVLAATDPANPYGAALPW
PDTELRPTRAAGALVVLVDGLLLAHLGRGGRTLNLFFDELPDGVGESTEQLATRVVQALG
AVISHGRMSRIVVEKINGESVFDTPMLGALKTAGASITPKGLRIGGQTVPARKPVTRTLE
DISFDDPPPMSFGNPFGRRR
NT seq 4743 nt   +upstreamnt  +downstreamnt
atgactacgaacattcttgaccgcttccgcccacatgtgcggacatggttcacggatgtt
ttcgcagctccgacgcccgttcaggagcaagcgtgggaagaaatttcggccgggtcgcat
gcgctagttgtcgccccgaccggctccggtaaaactcttgcagcgtttttgtgggcgatc
aattcactcgtcgatcagccggagcagcctgccttgcccgcgcttatcgacgccccgctg
cggcccactcgccgcggcgggaaagtaaaagtgctgtacatctcaccgctgaaggcacta
ggcgtggatgtggagaacaacctgagggcaccgctgcttggaattagcagggttgccgcc
aggctcgagatggcagagccggaagtcacggttggggtgcgctccggagataccccagcc
agcgagcgaaaccggcaactcagaactccgccggatatcctcatcaccactccagagtcg
ctgtacctcatgctcacgtccaaggctgcggcgatcctcgacgaggtccacaccgtcatc
atcgatgaaattcacgccatggcgggtaccaagcgtggtgtccacctgtctctcactttg
gaaagactggccgaggttgcgggcgatttccaacgcatcggcctgtccgccacggttcgt
ccgctcgaacgggtggcggcgttcctgggcggcgaccgcccagtcagcctgattgccccg
cagtcggaaaagcgctggcagctggatgtgcatgttccggtcgatgacctgtcggacctg
ccaactcccgatcaaggctctccgatcggggaagcggtcctcgatgatccgcacggtttt
ggcggcccgacaccggcacaggagtccgcactgccgcagcaaaaatccatctggccattc
attgagcaggagctctaccaagagattatggccgcccagtccaccctggtgttcgtgaat
tcgcggcgcagcgccgagcgcttgacgtcacgcctgaatgagctctacgcgatcgaacac
gaccctgctgcactgagccctgagttaagacgcgaccccgcgcagctgatgaaatcagtg
gatgtggcagggaaagctcccgcgatcattgctcgcgctcaccatggttctgtgtccaag
gaggaacgcgcccagacggaagccgccttgaaagcaggcgaattgaagtgcgtcgtggcc
accagctccctcgagctgggtattgacatgggtgccgtggacctagtggtacaggtggag
tccccaccgtcggtggcttctggtttgcagcgcgtggggcgcgccgggcactcggtaggc
gccgtatctcaaggctcgttctacccgaagcatcgcgctgacctggtgcaaagcgcggta
accgtgcagcggatgcgccaagggctcatcgaggaactcaaggtgccgcagaacgcgctc
gatgttctcctacagcagaccgtggcggcggcgtcgataagcgatgtgcacgtggacacc
tggtacgagtgcgtccgccgcgcctacccctatcgtgacctgcctcgcgacgtcttcgat
gcggtcatcgacctggcctccggcgtgtacccgtcgaccgattttgccgagctcaaaccc
cgcgtagtgttcgatcgcaccaccggcacactccaggggcggccgggtgcgcagcgcgtt
gcggtcaccagtggcggtaccatcccggaccgcggcatgttcggggtgttcctcgtgggg
tccgagggtgccccgcgccgcgtcggcgagctggacgaggagatggtgtacgaatcccgc
gtgggggacgtcttcaccctcggcgcgaccagctggcgcatcgaagacatcacgcgcgac
caggtactggtcagccccgcgccaggacacaccggacgcctgccattctggaccggcgat
caggcaggacgtcctgccgaactggggcgcgcggtgggggcattccgtcgtgaggtgcac
gcgaaccccggcgttgccaccgacttggatgagcgcgccaggaacaacctcatcgcattc
ctgaacgaacaagaggaagcaaccggcatcattccagacgagcaaaccctggtgctggag
cgttttcgtgatgagctgggcgattggcgcgtcgtgttgcactcgccgttcggtagggga
gtgaacgcagcttgggcgctcgcagtaggcgctcggatttcagaaaccaccggaatggac
gcgcaggcagtagcgggtgacgatggcatcatcttgcgcctgcccgagtccgaccgggaa
ccttccgccgatctcttcgtcttcgatgccgacgagatccgggacatcgtgaccgagcag
gtaggaaactcggcgctattcgcctcccgtttccgtgagtgcgccgcccgcggtttgctg
ctcccgcgacgcaaccctggcaaacgggccccgctgtggcagcaacgccagcgcgccgcg
cagctgctggacgtcgcccgaaagtacccgagcttcccgatcatcctggaaaccgtccgc
gaatgcctgcaggatgtctatgacctgccggagctgacccaggtacaaaaggatctcggc
ttgcggcgcatccgcattgccgaggtcacgaccgaacagccgagtcccttcgcctccagc
ctgttgttcaactacaccggcgcattcatgtacgagggcgattcgccactggcggaaaag
cgcgccgccgcgctggcactggatccaagtttgctggctaagctgctcggaacggtggag
ttgcgtgaactgctcgatcaagatgtcatcgctgagatccatgctcagctgcagcgcacc
acccctgaccggcgcgcccgcacggcagaagaactggccgacacgctccgtctcatcgga
ccgattccggtgtctgacctggaaaaccacaccgacgtttccttgggtgctgcccttgat
cagctcgcaggtcgagtcatggtggtgcgcatcgctggccgcgaccacctcgcccaaagt
ctcgacgctccgctgcttcgcgacgcgctcggcatccccgtccccgctggtgtctccgcc
caggccacggtcatcactgacgctttggcacagctggtgaacaggtatgcccgcagccgg
gggcccttcacagtggcagagttggctgaggtctttgggctcgggcactccacggcgctc
gcggcaatccagggcgcactgagccagaaagtactggtagaggggcacttccgggcggga
gttgaggcaatggagtactgcgcggttgaagtgctgcgtagaattcgctcgctgagctta
gctcgtgcgcgggcggaagcagagccagtctctaccagtgcgttcgcccgtttcctgccc
gagtggctcggcgtcgctccaatcggggaaagcccaaaactgcacggcgccgatggcgtg
tttcaagtgctggagcagctggccggcgtgcgtttgccggccagcgcgtgggaagcgctc
attctgccgagccgcatttctgactaccaccaaggcatgctcgacgagctcactgccagc
ggtgagatccgcatccttggcgcgggcgtcgcggcggccaaggatccgtggatcatgctg
ctgccagcagactacgctgccgaacttgcccccgaacagcacgacgcggcgctgtcgccg
ctgcaggagcaggtggtggaggtcttgggtaaaggcggcggcttctatttcgctgacctg
ctcgcagagctagatgtcccggctctcgaaatccgcgacgcactgtggagcttggtcgat
gctgggctggtcaccccggacagctttggtgctatccgggcgcggctttctggaacctcg
gtcaagggcgccgcacatcgtgcgtccaggcgccccacccgcggccgcctgcgcatgggt
cgaacctcctttgcacagagccagcagcaagggaccccgcctgacatgctggggcgctgg
tcgcttgccgtcacgcccagcactgataccacctcgcgttcggtcgcacacggcgaagcg
tggctcgatcgctatggcgtggtcacgcgtggttcgatcgtcgcggaggacgtgctcggc
ggctttgcactggcgtataaggtgctttcgcgcttcgaagaaaacggcaaggccctacgc
ggctacctgatcgaggggctgggcgccgcccagttctccacgccgtcgatcgtcgacagg
ctgcgtggcctcgcagatagccccgatctttccggctggccttccggcgccgacgacccc
cactgctatgtcctggcggcgactgaccccgccaacccttacggcgcggcgctgccatgg
ccggacaccgaactgcgccccacccgcgctgccggggcactcgtggtgcttgtcgacggc
ctgctcctcgcacaccttgggcgcggcggacgcaccctgaacctgtttttcgacgaactc
ccagacggtgtcggcgagagcacagagcaactggcgactcgcgttgtccaggcgctgggt
gcggtcatatctcacggccgaatgagccggattgtggtggaaaagatcaacggtgagtcg
gtgttcgacacgccgatgctcggcgcattgaaaacagcaggcgcgtcgatcactcccaag
ggactgcggatcggtgggcagacagtccctgcccggaaaccagtcacgcgcaccctggaa
gacatttcttttgatgaccctcctccaatgagctttggcaatcccttcggcaggaggcgc
taa

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