Corynebacterium kalinowskii: CKALI_09930
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Entry
CKALI_09930 CDS
T07849
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ckw
Corynebacterium kalinowskii
Pathway
ckw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKALI_09930 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckw03021
]
CKALI_09930 (rpoA)
03400 DNA repair and recombination proteins [BR:
ckw03400
]
CKALI_09930 (rpoA)
Enzymes [BR:
ckw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKALI_09930 (rpoA)
Transcription machinery [BR:
ckw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKALI_09930 (rpoA)
DNA repair and recombination proteins [BR:
ckw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKALI_09930 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
QGU02841
UniProt:
A0A6B8VSG6
LinkDB
All DBs
Position
complement(2073619..2074635)
Genome browser
AA seq
338 aa
AA seq
DB search
MLISQRPTLTEEFVDEARSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSVKIDGVL
HEFTTINGVKEDVSDIILNIKGIVLSSDSDEPVVMYLSKTGEGEVTAGDIQPPAGVEIHN
PDLHIATLNEQGRLDIELIVERGRGYVPATLNAGGAEIGRIPVDQIYSPVLKVSYKVEAT
RVEQRTDFDKLIIDVETKNSISARDALASAGKTLVELFGLARELNTAAEGIEIGPSPQET
EHIAAYSMAIEDLNFSVRSYNCLKRQEIHTVGELAECTESDLLDIRNFGQKSINEVKIKL
AGLGLTLKDAPEDFDPTQIEGYDAETGEFIDFDPEDSE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgctcatttcacagcgtcctaccctcaccgaggaattcgtcgacgaagctcgttcccgg
ttcatcattgagccactggagccaggtttcggctacacccttggtaactcgctgcgtcgt
accctgctgtcctctatcccaggtgcagcagtgaccagcgtcaagatcgatggtgtgctc
cacgagttcaccaccatcaacggtgtgaaggaagatgtctccgacatcatcctgaacatc
aagggcattgtgctgtcctctgactctgacgagccagtggtcatgtacctgagcaagact
ggcgaaggcgaggtcaccgctggtgacattcagcctccagctggtgtggagatccacaac
ccggatctgcacatcgctaccctcaatgagcagggtcgcctggacatcgagctgattgtc
gagcgtggccgtggctacgttccggcaaccctgaacgctggcggagccgagatcggtcgc
attcctgttgaccagatctactccccagtactcaaggtgagctacaaggtcgaagctact
cgtgttgagcagcgcaccgactttgacaagctgatcatcgatgttgagactaagaactcc
atctccgcacgtgacgcactcgcatctgcaggcaagactctggttgagctgttcggcctc
gctcgcgagctgaacaccgcagctgaaggcatcgaaatcggcccatctccacaggagact
gagcacatcgctgcttacagcatggcaattgaggacctgaacttctctgttcgctcctac
aactgcctgaagcgccaggaaatccacaccgttggtgagctcgcagagtgcaccgaatcg
gatctgctggatatccgcaacttcggtcagaagtccatcaacgaggtcaagatcaagctt
gcgggcctgggcttgaccctgaaggatgcacctgaagacttcgatccaacccagatcgaa
ggctacgacgctgagaccggcgagttcattgactttgacccggaagattctgagtaa
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