Corynebacterium kalinowskii: CKALI_10255
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Entry
CKALI_10255 CDS
T07849
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
ckw
Corynebacterium kalinowskii
Pathway
ckw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ckw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CKALI_10255 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckw03021
]
CKALI_10255 (rpoC)
03400 DNA repair and recombination proteins [BR:
ckw03400
]
CKALI_10255 (rpoC)
Enzymes [BR:
ckw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CKALI_10255 (rpoC)
Transcription machinery [BR:
ckw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CKALI_10255 (rpoC)
DNA repair and recombination proteins [BR:
ckw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CKALI_10255 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QGU02906
UniProt:
A0A6B8VW49
LinkDB
All DBs
Position
complement(2126108..2130091)
Genome browser
AA seq
1327 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
QCGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLERIIYFAANIITTVDDEARHNDLTTLEAEMLLEKKDVEADMESEIADRAQKLEED
LAELEAAGAKADAQKKVRSAAEKEMQHIRERAEREIDRLEEIWQTFVKLAPKQMIIDETI
YTELVDRYEDYFTGGMGAEAIQSLIRGFDLDAEAEILRDIINNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLDCIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENDYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARVLMLASNNILSPASGKPLAMPRLDMVTGLYFLTLDKKEDEFGGQ
GCYKPADDNGPAQGVYASMAEAIMAYDRGVLGLQAKIKVRISHLRPPADLEAELFPEGWN
KGDTWLADTTLGRIMFNELLPWNYSYLEGVMVRKGGGSDKIMLGDVITDLSARYPIITVA
QTMDKMKDAGFYWATRSGVTITMSDVLVLPNKDEMLDRYEAEARTIETKFLFGKLTARER
YDRLVELWKDATDEVGKAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVREED
CGTRQGVRVPVTEASGDKFVRHSLVETSVSGRVLAADAVDKASNVVLPAGTDLGELEIDA
LVNAGVEQIKVRSVLTCQTPTGVCAKCYGKSMASGHQVDIGEAVGIVAAQSIGEPGTQLT
MRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASVAGKVHLDDEGNFYTLTIEPEDG
SDNVVYEKLSKRQGLAMIKVPMESNPDAMIERTLREGDRVEVGDRLLRGPADPHDVLEVL
GRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGTTEFLPGTLVDLSE
AKRANAQAIADAGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAINKRSDKL
IGLKENVIIGKLIPAGTGISRYRNISVKPTEAARNAAYSIPTYGDSIYGDDGYGEFTGAS
VPLDETF
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgacgagctccgcattggactcgcaaccgctgacgacatt
cgtcgttggtcaaagggcgaggtcaaaaagcctgagaccatcaactaccgtactttgaag
cctgagaaggacggcctcttctgcgagcgcatcttcggtccaactcgtgactgggaatgc
cagtgtggcaagtacaagcgcgtccgttacaagggcatcatctgtgagcgctgtggcgtt
gaggtcaccaagtccaaggttcgccgtgagcgcatgggtcacattgagctggccgcgccg
gtaacccacatttggtacttcaagggcgtgccatctcgcctgggctacctgctggacctg
gctccaaaggacctggagcgcatcatttactttgctgccaacatcatcaccaccgttgat
gacgaggcacgccacaatgacctgaccactctggaagcagaaatgctgctggagaagaag
gacgttgaggcggacatggaatctgagatcgctgatcgcgctcagaagctggaagaggac
cttgctgaactcgaggctgctggcgctaaggccgacgcccagaagaaggttcgttccgct
gccgaaaaggaaatgcagcacatccgcgaacgcgctgagcgcgagatcgaccgcttggaa
gagatctggcagacctttgtcaagctcgctccaaagcagatgatcatcgacgagaccatc
tacaccgagctcgttgaccgctacgaggattacttcaccggcggcatgggtgctgaagcg
atccaaagcctcattcgtggtttcgacctcgacgcagaggctgagattctgcgcgacatc
atcaacaacggcaagggccagaagaagatgcgtgccctgaagcgcctgaaggtcgtcgcg
gccttccagcgctccggcaacgatcctgctggcatggttctagattgcattccagtgatc
ccaccagagctgcgcccaatggtgcagctcgacggcggtcgctttgcaacctccgacctc
aacgacctctaccgtcgtgtgatcaaccgcaacaaccgtttgaagcgcatgatcgacctg
ggtgcaccagagatcatcgtgaacaacgaaaagcgcatgctgcaggaatctgtggacgca
ctcttcgataacggtcgtcgtggccgcccggtcaccggaccaggcaaccgcccactgaag
tccctgtctgacttgctcaagggcaagcagggtcgtttccgtcagaacctgctcggtaag
cgcgtggactactccggtcgttccgttattatcgttggtcctcagctgcgcctgcacgag
tgtggcctgccgaagctgatggctctggagctgttcaagccattcgtcatgaagcgtctg
gtggaaaacgactacgcgcagaacattaagtccgctaagcgcatggttgaacgccagcgc
ccagaggtgtgggacgttctggaagaagccatttccgagcacccagtgatgctgaaccgt
gcaccaacgctgcaccgtctcggcatccaggccttcgagcctgtgctggttgaaggtaag
gctattcagctgcacccactggcttgtgaagcattcaacgccgacttcgacggtgaccag
atggcagttcacctgccactgtctgccgaagcgcaggcagaagcacgcgtgctgatgctt
gcttccaacaacatcctgtccccagcatccggtaagccactggctatgccacgtctggac
atggtgaccggtctgtacttcctgaccctggataagaaggaagacgagttcggcggtcag
ggctgctacaagccagccgacgataatggtccggctcagggtgtctacgcttcgatggct
gaagccatcatggcgtacgaccgcggcgttcttggcctccaggccaagatcaaggtgcgt
atctcgcacctgcgtccacctgcagacctcgaagcagagctgttcccagagggctggaac
aagggcgacacctggttggctgacaccacccttggtcggatcatgttcaatgaactgctg
ccttggaactactcctacctcgagggcgtcatggtccgtaagggtggcggcagcgacaag
atcatgctcggcgacgtcattactgacctgtccgcgcgctacccaattatcaccgtcgcg
cagaccatggacaagatgaaggatgctggtttctactgggcaacccgctctggcgtaacc
atcaccatgtctgacgtgctagttctgcctaacaaggacgaaatgcttgatcgttacgaa
gctgaggctcgtacgatcgagactaagttcctgttcggtaagctcaccgcccgcgaacgc
tacgatcgcctggtcgagctgtggaaggacgcaaccgacgaggttggtaaggctgtcgag
gatctctacccagatgacaacccgattccaatgatcgtgaagtctggtgctgcaggtaac
atgcgtcagatctggaccctggccggcatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgaccaattaagacttccttccgtgaaggcctaacggttctcgagtacttc
aacaactcccacggttcccgtaagggtctggccgataccgcactgcgtaccgcagactct
ggctacctgacccgtcgtctcgtcgacgtcgcacaggatgtcattgttcgcgaagaagac
tgtggcacccgccagggtgtccgtgtcccagtgaccgaggcttccggcgacaagttcgtc
cgccactccctggtcgagacttccgtctccggccgcgtgttggctgccgatgccgtcgat
aaggcaagcaacgttgtgctccctgcgggcaccgacctgggcgagctggagatcgacgcg
ctcgttaacgctggcgtcgagcagatcaaggttcgctccgtgctgacctgtcagacccca
accggcgtgtgcgcaaagtgctacggcaagtccatggcatccggccaccaggttgatatc
ggtgaggcagtcggcatcgttgctgcacagtccattggtgagcctggtacccagctgacc
atgcgtactttccaccagggtggtgtcggtggcgacattaccggtggtctgccacgtgtt
caggagctgttcgaagcccgcgttcctaagaaccgcgctccgattgcttctgtcgccggc
aaggtgcacctggatgatgagggtaacttctacaccctgacgatcgagccagaagacggc
tcggacaacgtggtgtacgagaagctctcgaagcgtcagggcctggcaatgatcaaggtt
ccgatggaatccaacccagatgccatgattgagcgcacgctgcgtgaaggcgaccgcgtt
gaggtgggcgaccgcctcctgcgtggaccagccgacccacacgacgtgctcgaggttttg
ggccgacgtggtgttgagcagcacctgattgatgaagtgcaggccgtgtaccgcgcccag
ggtgtggcaattcacgacaagcacatcgaaatcatcattcgccagatgctgcgccgcggt
accgtcatcgaatccggcaccaccgaattcctgccgggcaccctggttgacctgtccgaa
gcaaagcgcgccaacgcacaggcaattgccgacgcgggccagcctgcagagcttcgttcc
gaaatcatgggtatcaccaaggcttccctggctactgaatcctggctctccgcggcctcc
ttccaggagaccacgcgtgtgcttaccgacgccgccatcaacaagcgctcggataagctc
atcggcctcaaggagaacgtgatcatcggtaagctgatcccagctggtacgggtatttcg
cgctaccgcaacatctcggtcaagccaaccgaagcagcacgcaacgccgcgtactcgatc
ccaacctacggtgattcgatttacggcgacgacggctacggtgaattcaccggcgcctcc
gtgcctctcgacgagaccttctag
DBGET
integrated database retrieval system
