Campylobacter lari RM2100: CLA_0406
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Entry
CLA_0406 CDS
T00858
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cla
Campylobacter lari RM2100
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cla03016
]
CLA_0406 (truD)
Enzymes [BR:
cla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CLA_0406 (truD)
Transfer RNA biogenesis [BR:
cla03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLA_0406 (truD)
Prokaryotic type
CLA_0406 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF2732
Motif
Other DBs
NCBI-ProteinID:
ACM63764
UniProt:
B9KFC9
LinkDB
All DBs
Position
380752..381879
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AA seq
375 aa
AA seq
DB search
MEKNIIFKPLYALKHSPINVYFSKNSNDFVVREKPLYEFSGKGEHLILHIQKKDLSTSEA
LRILSEQSGVKMRDFGYCGLKDKQGLTTQYISMPKKFEENLKNFKHEKMKILESFVHDNK
LRIGHLKGNSFFIRLKKVLKVDALKIEQAFKNIQEQGFANYFGYQRFGKFQDNFSQGLEI
LKGKNIKNKKMQEFLISAFQSELFNKYLSKRVEISHFINDFSEKEISQIYALDKEEIKSL
KNQKQFFKLLKGEVLGHYPFGKCFLCEDLINEVERFNQKDISAMGLLLGERAYESKNDTF
ARKIEDEIFSNFYEYKTKMQGSRRFLWSYMQDCKCFYDEEKAHFTLEFFLQKGSYATVIL
EEILHTDIFEQNHNI
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaacatcatttttaaaccactttatgctttaaaacatagtccaataaatgtg
tatttttcaaaaaatagcaatgattttgtcgttagagaaaaacctttgtatgaatttagt
ggcaagggggagcatttaattttacatatacaaaaaaaagatcttagtacaagtgaggct
ttgagaattttaagtgagcaaagcggtgtgaaaatgagagattttggatattgtggatta
aaagacaagcaaggtttaactactcaatacatctcaatgcctaaaaaatttgaagagaat
ttaaaaaatttcaagcatgaaaaaatgaaaattttagaaagttttgttcatgataataag
cttagaatagggcatttaaaaggaaattcattttttataagattaaaaaaagttttaaaa
gtagatgctttaaagatagaacaagcctttaaaaatatccaagagcaaggttttgcaaat
tattttggatatcagcgttttggtaaatttcaagataatttttcacaaggattagaaatt
ttaaagggcaaaaatataaaaaataaaaaaatgcaagaatttttaatctctgcttttcaa
agtgagctttttaataaatacttgagtaaaagagtggaaatttcacattttattaatgat
tttagcgaaaaagagataagccaaatttatgctcttgataaagaagaaatcaaaagtttg
aaaaatcaaaagcagttttttaaacttttaaaaggtgaagttttagggcattatcctttt
ggaaaatgttttttgtgtgaagatttaataaatgaagtagaaagatttaatcaaaaagat
attagtgctatgggacttttgcttggcgaaagggcatatgagagtaaaaatgatactttt
gctagaaaaatagaagatgaaatttttagtaatttttatgagtataaaactaaaatgcaa
ggctcaagaagatttttatggtcatatatgcaagattgtaaatgtttttatgatgaagaa
aaagcacattttactttggaatttttcttacaaaaaggctcatatgccacagtgatctta
gaagaaattttacatacagatatctttgaacaaaaccataatatataa
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