Campylobacter lari RM2100: CLA_0471
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Entry
CLA_0471 CDS
T00858
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cla
Campylobacter lari RM2100
Pathway
cla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLA_0471 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cla03021
]
CLA_0471 (rho)
03019 Messenger RNA biogenesis [BR:
cla03019
]
CLA_0471 (rho)
Transcription machinery [BR:
cla03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLA_0471 (rho)
Messenger RNA biogenesis [BR:
cla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLA_0471 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Mor
Spore_III_AA
ATPase_2
AAA
OB_RNB
AAA_22
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ACM63819
UniProt:
B9KFI4
LinkDB
All DBs
Position
complement(448628..449932)
Genome browser
AA seq
434 aa
AA seq
DB search
MENTKEKKQHQRTHIPVEGYKIEDLKLLDLESLVKIANEAEIENPREFRRQDLIFEILKA
QTKKGGFILFTGILEISPEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQV
REPKDQEKYYALLKIEAINYLPLKEARERPLFDNLTPIFPTQKLKLEYDPLKLTGRMLDL
FAPIGKGQRSLIVAPPRTGKTELMKELATAIAKNHPEAHLIVLLVDERPEEVTDMQRCVK
GEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVVILLDSITRLARAYNTATPSSGKV
LSGGVDANALHKPKRFFGAARNIENGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIV
LDRNISDRRIYPAINIIKSGTRKEELLQGVEKLQKIWAIRSAISQMDDIEALKFLYSKML
KTKSNEELLSIMNE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacaaaagaaaaaaaacaacatcaaagaacacacattccagtggaaggttat
aaaatagaagatttaaagttgcttgatctagaaagcttagttaaaattgccaatgaagca
gaaatagaaaatccaagagaatttagaagacaagatcttatttttgaaattctaaaagcc
caaaccaaaaaaggtggttttatactttttacaggaattttagaaatttcacctgagggt
tatggctttttacgcggaatggattcaaatttaagcgatagtgtaaatgatgcttatgta
tcaaactcacaaattcgtaaattcgctcttcgcgtgggagatatagttaccggtcaagtt
agagagccaaaagaccaagaaaaatactatgctttgttaaaaatagaagcgattaattat
cttcctcttaaagaagctagagaaagacctttatttgacaatcttactccaatttttcca
acacaaaaattaaaattagaatatgatcctttaaaactaacaggtagaatgcttgactta
tttgcccctataggaaaaggccaaagaagcttaatcgtagcacctcctagaactggtaaa
acagaattaatgaaagaattagcaactgcaattgccaaaaaccaccctgaagctcatttg
atagtacttttagtagatgagcgtccagaagaagttacagatatgcaaagatgtgtaaaa
ggtgaagtttttagctctacttttgatttaccagcttacaatcatgtaagagtagctgaa
cttgttatagaaaaagcaaaaaggatggtagaaactggtaaagatgttgtaatattgctt
gatagtattacaagattagcaagagcttataatactgctacaccaagtagtggtaaggtt
ttaagcggtggggttgatgcaaatgcattgcataaaccaaaacgcttctttggagcagca
agaaatatagaaaatggtggttcattaaccataatagcaacagcgctcattgaaactggc
tcaagaatggatgaagtgatttttgaagaattcaaaggtacaggaaatagtgaaatcgtt
cttgatagaaatatttcagatagaagaatttaccctgcaattaatatcataaaatcaggc
actagaaaagaagaattactacaaggtgttgaaaaattacaaaaaatttgggctattaga
tcagctatttcacaaatggatgatatagaagctttaaaattcttatactctaaaatgcta
aaaaccaaaagtaacgaagaattattatctataatgaatgagtaa
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