Campylobacter lari RM2100: CLA_0609
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Entry
CLA_0609 CDS
T00858
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cla
Campylobacter lari RM2100
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cla03009
]
CLA_0609 (rluD)
Enzymes [BR:
cla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CLA_0609 (rluD)
Ribosome biogenesis [BR:
cla03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLA_0609 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Phage_L54a_excisionase
Motif
Other DBs
NCBI-ProteinID:
ACM63938
UniProt:
B9KFV3
LinkDB
All DBs
Position
579206..580168
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AA seq
320 aa
AA seq
DB search
MLKISSLCEERLDIFLSDILKQSRSQVAKLIKENCIYINEKIENKSSKKIKQKDEISIFL
PLIKEAKESYTPEFDIEILYEDDDVLVLNKAPNIVVHGASSVKEATLVDWLLHKGYTLSN
LNGEHRAGLVHRLDKGTSGAIIIAKNNQAHQFLANQLLDKSMGRFYLALSELPLKNDKMS
NEKAIMRCPNNRLKKITTNTKNPLAKNAKTDFINLLSAKNCSLIAAKLYTGRTHQIRTHL
ADFNRYILGDELYGYKGKIKYNRVMLHAYLIYFIHPRTKELMFIKAPMFDDFYQILKENF
TQGEIDEKTSLDYLKFCFGF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaatttcatcactttgtgaagaaagattggatatttttttatcagatatactt
aagcaaagtcgttcgcaagttgctaaactaatcaaagaaaactgcatatatattaatgaa
aaaatagaaaacaaaagctctaaaaaaattaaacaaaaagatgaaataagtattttttta
cctttaataaaagaagccaaagaaagctacacacctgagtttgatatagaaattttatat
gaagatgatgatgttttagttttaaacaaagctcctaatattgttgtgcatggtgcaagt
agtgttaaagaagcgactttggtggattggcttttgcataagggctatactttatcaaat
ttaaatggagagcatagagcagggcttgtgcatagacttgataaaggcacaagcggagct
atcatcatagctaaaaacaatcaagcacatcaatttttagcaaatcagcttttagataaa
agtatgggaagattttatcttgctttgagtgaattgcctttgaaaaatgataaaatgagt
aatgaaaaagccattatgcgttgtcctaataataggcttaaaaaaattactacaaatacc
aaaaatcctttagcaaaaaatgcaaaaacagattttataaatttattaagtgctaaaaac
tgctctttaatagctgctaaattatatacaggaagaacccatcaaatcaggacgcatttg
gcagattttaatcgctatattttaggagatgaattatacggatataaaggaaaaataaag
tataatagagtaatgcttcatgcgtatttgatttattttattcatcctaggactaaagaa
ttaatgtttataaaagctcctatgtttgatgatttttatcaaattttaaaagaaaatttt
acacaaggagagatagatgaaaaaacttcactggattatcttaagttctgctttggcttt
tag
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