Campylobacter lari RM2100: CLA_0928
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Entry
CLA_0928 CDS
T00858
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cla
Campylobacter lari RM2100
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cla03016
]
CLA_0928 (ybbB)
Enzymes [BR:
cla01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CLA_0928 (ybbB)
Transfer RNA biogenesis [BR:
cla03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CLA_0928 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
DSPc
RsgA_GTPase
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ACM64252
UniProt:
B9KCG3
LinkDB
All DBs
Position
889609..890592
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AA seq
327 aa
AA seq
DB search
MYKEVDFENFLKFNFDLLIDARSPKEYSHAHIKSAQNYYALSDNEFEEIGTLYKKNKGLA
KAKGASYICKNMSEHINKIYQSYKIGSLVGIYCARGGKRSKAIALILAELGYRVVRLEGG
YKAYRSYVSEFFRKDLNIEFLCLCGNTASGKSDLIQTLDNALNLEKLANHQGSSFGKIYG
EQPSQKAFEDELFYFLKDYSHKTCFIEAESRQIGNLIIPLNLYNSMQKAKKIWCECDTDL
RIQRVLKNYTPMDKKVFYQCVEKISPYISKDFKLKLCQNYEENNLELCVKMLFEYYDKVY
KKPTKIDYFINSSNLDEAKKHLMSLNS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagaagttgattttgaaaattttttaaaatttaattttgatcttttaattgat
gcaagaagtcccaaagaatacagccatgctcatataaaatctgcgcaaaattactatgca
ctaagtgataatgaatttgaagaaataggcacactttataagaaaaacaaaggcttagct
aaagcaaaaggcgcaagttatatttgtaaaaatatgagtgagcatattaataaaatttat
caaagttataaaataggctctttggtgggaatttattgtgcaagaggtggtaaaagatca
aaagctattgctttaatcttagctgaacttggttatagggttgtaagattagaaggtgga
tataaagcttatagaagttatgtgagtgagttttttagaaaagatttaaatattgagttt
ttatgcctttgtggtaatacagcaagtggcaaaagtgatttaatccaaactttagataat
gctttaaatttagaaaaactagccaaccatcaaggatcaagttttggtaaaatttatgga
gaacaaccaagccaaaaagcttttgaagatgaattgttttattttttaaaagattatagc
cataaaacttgttttatagaagctgaaagcagacaaattggaaatttaatcatcccgcta
aatttatacaatagtatgcaaaaagctaagaaaatttggtgtgaatgcgacacagacttg
cgtattcaaagagttttaaaaaactacactccaatggataaaaaagtattttatcaatgt
gttgaaaaaatatcaccttatatcagcaaggattttaaactaaaactttgtcaaaattat
gaagaaaataatttagaactttgtgtaaaaatgctttttgaatattatgataaagtatat
aaaaaacctacaaaaattgattattttatcaatagttctaatttagatgaagctaaaaaa
catcttatgagtttaaactcataa
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