Campylobacter lari RM2100: CLA_0969
Help
Entry
CLA_0969 CDS
T00858
Symbol
trmA
Name
(GenBank) tRNA m5U54 methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
cla
Campylobacter lari RM2100
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cla03016
]
CLA_0969 (trmA)
Enzymes [BR:
cla01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
CLA_0969 (trmA)
Transfer RNA biogenesis [BR:
cla03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
CLA_0969 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
Methyltransf_25
Methyltransf_4
RrnaAD
MTS
Methyltransf_23
Methyltransf_12
TRM5-TYW2_MTfase
Methyltransf_11
DREV
PrmA
Motif
Other DBs
NCBI-ProteinID:
ACM64292
UniProt:
B9KCK3
LinkDB
All DBs
Position
complement(925440..926480)
Genome browser
AA seq
346 aa
AA seq
DB search
MHFEEKIALNKALFSSLYDKEIQCFKSPLKAYRTRAEFCIYHHENGEISYAMYENKKKIP
IKNFEIADEKIQAYMPILLDNLNENLKHKLFGVEFLATKIDLSITLLYHKNIESITQDLQ
ELSKKLNLKLIARSRGKKLVFNGENLKQILNIKNKEIFYEFNNDCFIQPNTTINEKMIEW
VIDLLEKEERKDLLELYCGYGNFTIALAKYFNKILATEISKKNIEFALKNCDLNSIKNIS
FTRLSSEELSQALKKEREFNRLKGIDLDGFNISHVLVDPPRAGLDVSVIELIKKYENIIY
ISCNPITLRENLEILSQSHEILNLAFFDQFANTSHLECGVHLRLKA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcattttgaagaaaagattgctttaaataaagcattgttttcttctttatatgataaa
gaaattcagtgctttaaatcgcctttaaaagcttatagaacaagggcagaattttgcata
tatcatcatgaaaatggagaaatttcttatgcaatgtatgaaaataagaaaaaaattcct
ataaaaaattttgaaatagcagatgaaaaaattcaagcatatatgcctattttattagac
aatttaaatgaaaatttaaagcataaactttttggggtagaatttttagctacaaaaata
gatttaagcataactttactttatcataaaaatatagaatcaatcacgcaagacttacaa
gaattatccaaaaagttaaatcttaaactcattgcaagaagtaggggtaaaaaacttgta
tttaatggagaaaatttaaagcaaattttaaatattaaaaacaaagaaattttttatgag
tttaataatgattgttttatacaacccaatacaaccataaatgaaaaaatgattgaatgg
gtgattgatttattagaaaaagaagaaagaaaagatttattagagctttattgtggttat
ggaaattttaccatagcattagcaaagtattttaataaaattttagcgactgaaatttct
aaaaaaaacattgaatttgctttgaaaaattgtgatttaaattccataaaaaatataagc
tttacaagactttctagtgaagagctaagtcaagctttaaaaaaagaaagagaatttaat
cgcttaaaaggtatagatttagatggttttaacatatctcatgttttggtagatccacca
agagcagggcttgatgtaagcgtgattgagcttattaaaaaatatgaaaatattatttat
atttcttgcaatcctatcactttgagagaaaatcttgaaattctatctcaaagtcatgaa
attttaaatttggcattttttgatcaatttgccaatacttcccatcttgaatgtggggtg
catttaagattaaaagcttag
DBGET
integrated database retrieval system
