Campylobacter lari RM2100: CLA_1027
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Entry
CLA_1027 CDS
T00858
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cla
Campylobacter lari RM2100
Pathway
cla03030
DNA replication
cla03430
Mismatch repair
cla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLA_1027 (dnaQ)
03430 Mismatch repair
CLA_1027 (dnaQ)
03440 Homologous recombination
CLA_1027 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cla03032
]
CLA_1027 (dnaQ)
03400 DNA repair and recombination proteins [BR:
cla03400
]
CLA_1027 (dnaQ)
Enzymes [BR:
cla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLA_1027 (dnaQ)
DNA replication proteins [BR:
cla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLA_1027 (dnaQ)
DNA repair and recombination proteins [BR:
cla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLA_1027 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
HTH_52
Motif
Other DBs
NCBI-ProteinID:
ACM64349
UniProt:
B9KCR0
LinkDB
All DBs
Position
complement(981486..982250)
Genome browser
AA seq
254 aa
AA seq
DB search
MSQQQIDDLIIKLSKENKPFPWVLKELAKIEELNHYEFDLYIFELLGLGVELNAQNCLCL
KSKNTKIKDEIFCVVDIESTGGIKSGQILEIGAVKIQNYKEIDRFESFVKVESIPENITE
LTGISLDMVENAPSLKTVLNNFKLFLKDSIFVAHNVRFDYHFISKAMYENDFGVLLNRRL
CTIDLAKKCIESPKYGLDALKEFLCIESKHHRALSDALAASEILKYCLKKIPFYIKNTEE
LLHFSKQAKNQIKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaacaacaaatcgatgatttaatcatcaagctaagcaaagaaaacaaacctttt
ccttgggttttaaaagaacttgcaaaaatagaagaattaaatcattatgagtttgattta
tatatttttgagcttttagggctaggagtggagcttaatgcacaaaattgcttgtgctta
aaaagtaaaaatacaaaaataaaagatgagattttttgtgtagtagatattgaaagcact
ggtgggataaaaagtggtcaaattttagaaataggcgcagtgaaaattcaaaactataaa
gaaattgatagatttgagagttttgtaaaagtagaaagtatacctgaaaatattacagaa
ttaactggaattagtttagatatggtagaaaatgctccttctttgaaaactgtgttaaat
aattttaaattatttttaaaagatagcatttttgtagcacacaatgtgcgttttgattat
cattttatatctaaagctatgtatgaaaatgattttggagtgcttttaaatagaagatta
tgtactattgatttagctaaaaaatgcattgaaagtcccaaatacggccttgatgcgcta
aaagagtttttgtgtattgaaagtaagcatcacagggccttaagtgatgctttggctgca
agtgaaattttaaaatactgtcttaaaaaaattcctttttacattaaaaatactgaagaa
ttgttacattttagcaagcaagctaaaaatcaaataaaaaaataa
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