Campylobacter lari RM2100: CLA_1056
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Entry
CLA_1056 CDS
T00858
Name
(GenBank) UvrD/REP family helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cla
Campylobacter lari RM2100
Pathway
cla03420
Nucleotide excision repair
cla03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLA_1056
03430 Mismatch repair
CLA_1056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cla03400
]
CLA_1056
Enzymes [BR:
cla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLA_1056
DNA repair and recombination proteins [BR:
cla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLA_1056
MMR (mismatch excision repair)
Other MMR factors
CLA_1056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
PcrA_UvrD_tudor
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ACM64378
UniProt:
B9KCT9
LinkDB
All DBs
Position
1012136..1014199
Genome browser
AA seq
687 aa
AA seq
DB search
MSFFEGLNDSQKEAIMHIDGAMLILAGAGSGKTKTITARLAYLIDHIGVPAQNTLTLTFT
NKAANVMKTRALALLQDQNLHNPLLCTFHKFGLLFLRLYSERINRANNFVIIDTDDKKKI
LKDLASENLQSSLASIGAYISNFKNQSKSAQEIRKELEFLKDEKNKNYEEIIHLYEQYEH
FLIQNNFMDFDDLLMLTNKILEDEAFAKEQSQKYTYITVDEYQDTNALQYQILKKLCASH
ENICVVGDDDQSIYGWRGAKIENILNFKEQFNNVKLVKLEQNYRSTSAILQAANELIEHN
RKRLGKTLICTKDEGEEITILQNDDEKIESFKVAREVSKLLNSGINPSEIAILYRVNALS
RALEEAFSKEKIPFKLLSGIRFYERAEIKDIISYLRLLSNLNDDYSFKRIINRPKRNFGN
ASLEKLENYAKENHLSLFESLCALQGSGFFSKKTDKELEKFILSMHKIKEKDDLLAMILA
LEEEFKIKEFYKDNPEGEDKLLNIDELYANLKDKISHGNYNGLDDILNEISLLNEQDGLD
KESICIMSIHASKGLEFDYVFIIGLEEGFFPLTSESSNIEEERRLAYVAITRAKKKLYLS
YANSRFYKGSRTRLEKSRFFGESNVIKKELTLDHQKNCYKKGDLIKHKIFGIGRVTGVSK
IGAEEKLTINFGGIERMIMSSFVEKVI
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttttgaaggtttaaatgatagccaaaaagaagctatcatgcatattgatgga
gctatgctgatactggcaggtgcaggtagtggaaagactaaaaccattaccgctagactt
gcctatttaatcgatcatataggtgttcctgcgcaaaataccctcacactaacctttaca
aataaagctgctaatgtaatgaaaacaagagccttagcacttttacaagatcaaaatttg
cacaatccccttttatgcacttttcataaatttggcttattgtttttaagactttatagc
gaaagaattaatagggcaaataattttgtcattattgatacagatgataaaaagaaaata
ctaaaagatttagctagcgaaaatttacaaagctctttagcaagcataggtgcttatatt
tcaaattttaaaaatcaaagcaaaagcgctcaagaaatacgcaaagaattagaattttta
aaagatgaaaaaaacaaaaattacgaagaaatcattcatttgtatgaacaatacgagcat
tttttaatccaaaacaatttcatggattttgatgatttgctcatgctaactaataaaatt
ttagaagatgaagcttttgcaaaagagcaaagtcaaaaatatacttatataacagtagat
gagtatcaagataccaatgccttgcaatatcaaattctaaaaaaactttgtgcgtctcat
gaaaacatctgcgtagtaggtgatgatgatcaaagtatttatggttggcgtggggctaaa
atagaaaatatcttaaatttcaaagaacaatttaataatgtaaaattagttaaactagag
caaaactaccgctcaactagcgctattttacaagctgcaaatgagcttatagagcataat
agaaaaagactaggaaaaactttaatttgtactaaagatgagggcgaagaaatcacaatt
ttgcaaaatgatgatgaaaaaattgaaagttttaaggttgcaagagaagtttcaaaactt
ttaaactcagggattaatcctagtgaaatagccatactttatagagtaaatgccctatct
cgcgctcttgaagaagcttttagtaaagaaaaaattccttttaaattgctaagcggaatt
cgtttttatgaaagagctgagattaaagatatcatttcttatttaagattgctttcaaat
ttaaatgatgattattcttttaaacgcattatcaatcgtcctaaaagaaactttggtaat
gcaagtttagaaaagctagaaaattatgctaaagaaaatcatttatctttatttgaaagc
ttatgtgctttacaaggaagtggattttttagcaaaaaaacagataaagaattagaaaaa
ttcatactaagcatgcacaaaatcaaagaaaaagatgatttgcttgcaatgattttagcc
ttagaagaagaatttaaaatcaaagaattttacaaagataatccagagggtgaagataaa
cttttaaacatagatgaactttatgctaacctaaaagataaaatctctcatggaaattat
aatggcttagatgatattttaaatgaaatttctttactcaatgaacaagatggacttgat
aaagaaagtatttgcattatgagtattcatgcaagtaaaggacttgagtttgattatgtt
tttatcataggcttagaagaaggattttttccactcactagcgagtcaagcaatatagaa
gaagaaagaagacttgcctatgtagcaatcactagagccaagaaaaaactttatttaagt
tatgctaattctagattttataaaggaagtcgcacaagattagaaaaaagtagatttttt
ggcgagagcaatgtaatcaaaaaagaattaacactagatcatcaaaaaaattgctacaaa
aaaggcgatttaatcaaacataaaatttttggcataggcagagtcactggggtaagtaaa
ataggagctgaagaaaaactcacgattaattttggaggcatagaaagaatgataatgtca
agttttgtggaaaaagtgatatga
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