Campylobacter lari RM2100: CLA_1346
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Entry
CLA_1346 CDS
T00858
Symbol
uvrA
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cla
Campylobacter lari RM2100
Pathway
cla03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLA_1346 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cla03400
]
CLA_1346 (uvrA)
DNA repair and recombination proteins [BR:
cla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLA_1346 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CLA_1346 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
nSTAND3
RsgA_GTPase
AAA_16
AAA_21
DnaJ_CXXCXGXG
AAA_33
APS_kinase
AAA_23
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ACM64661
UniProt:
B9KDM3
LinkDB
All DBs
Position
complement(1295668..1298493)
Genome browser
AA seq
941 aa
AA seq
DB search
MNKDKIIIIGAKENNLKNINLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLS
AYARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARIGTQ
HCHKCGQKISSMSAADIVGEILKLPKGAKIVIYAPLIKEKKGTFADLLENLVAKGYVRAQ
IDGVLTRLDEDIELAKTKKHTIKLVIDRLQIQDDMLARLASDIEKGLSESFGEVEIEVLN
NEELNIPKHFHYSEHNACFDCKISFPLLEPLSFSFNSPKGACPSCDGLGIRYTLDMKKLI
NEELSLEAGAIKLLYGFNKSYYYKFLMAFCEQNDIRIKIPYNELSEEEKRLVLYGNAKEI
NFLWKRHRLSRKFEGAVKYAYEMLKDEKDLSEYMSEKTCKDCNGHRLRAESLAVKVAEKN
LGEILDMSIENTTAFFSKETNFAYLSEQERLIAKPIFKEINERLFFLYDVGLGYLSLGRD
ARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIV
VEHDKMTIEEADFIVDIGPNAGKFGGEVVFSGTYKELLKSKSQTALYMSGKKQIAHQKNR
EQKDFISLKDVSINNIQNLSVDFPLHNLVAITGVSGSGKSSLILQTLLPFAKEELNRAKK
VKKLSGVKIEGLEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYK
AGRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVTCDVCNGKRYNDATLEIKYKGKSIAD
VLNMSIIEASEFFTLVPKIKQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRS
DTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLGNSVFVIEHNLDVIKNADYIIDMGPE
GGVKGGKVIAKGSVEELVKNHKKSGSYTGYYLNLELKNKED
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagacaaaataattataattggtgctaaggaaaataatcttaaaaatattaat
ctagaaattcctaaaaataaactcatagtttttacaggacttagtggaagtggtaaatct
actttagcctttggcacgctttatgcagaaggacaacgccgttatattgaaagtttaagt
gcttatgcaaggcagtttttagataaagtgggtaagccaaatgtcgataaaatagaaggt
ttaacccctgccattgccattgatcaaaaaacaacttcaaaaaatcctcgatcaaccgtt
ggaaccattactgaaatttatgattatttaagattattatatgcaagaattggcacgcaa
cattgccacaaatgcggacaaaaaatctcatctatgagtgcagcagatatcgtaggtgaa
atcttaaagcttccaaaaggagcaaaaattgtcatttacgcgcctttgatcaaagaaaaa
aaaggaacttttgcagatcttttggaaaatttagtcgcaaaaggttatgttagagcacaa
attgatggggttttaacgcgtcttgatgaggatattgagcttgctaaaactaaaaaacat
acaataaaacttgtaatagatagacttcaaattcaagatgatatgctagcaagacttgca
agtgatatagaaaaaggattgagtgagagttttggcgaggtagaaattgaagttttaaat
aatgaagaattaaacatacctaagcattttcattatagtgagcataatgcttgttttgat
tgtaaaatttcttttcctttgcttgagcctttgagtttttcttttaattctccaaaaggc
gcttgtccaagttgtgatggtcttggtataagatatacactggatatgaaaaagcttatc
aatgaagaattaagcttagaagcaggagctataaaacttttatatgggtttaataaaagt
tattattataaatttttaatggcattttgcgagcaaaatgatatcaggataaaaattcca
tataatgagctaagcgaagaagaaaagcgtttggtgctttatggtaatgctaaggaaatt
aactttttatggaaaagacatcgtttaagtcgtaaatttgaaggtgcggttaaatatgcc
tatgaaatgctaaaagatgaaaaagatttaagcgagtatatgagtgaaaaaacttgcaaa
gattgcaatggtcatcgtttaagagctgagagtttagctgtaaaagttgcagaaaaaaat
ttgggtgaaattttagatatgagcatagaaaataccactgcatttttttcaaaagaaact
aattttgcgtatttaagtgaacaagaaagattgatagctaagcctatttttaaagaaatt
aatgaaagattattttttctttatgatgtaggacttgggtatttatccttagggcgtgat
gcaagaaccattagtggaggagaagctcaaagaattcgtatagcttctcaaattggtagt
ggtttaagcggggtgatgtatgttttagatgagcctagtattggtttgcatgagcgagat
acagcaaaactcattaaaactttaagaaatcttcagcaaaagggtaatactttaatcgta
gttgagcatgataaaatgactatagaagaagcagattttattgtagatattggcccaaat
gctggtaaatttggtggagaggtcgtatttagtggaacttataaagaattattaaaaagc
aaaagccaaaccgccctttatatgagtggcaaaaagcaaattgctcatcaaaaaaacaga
gaacaaaaagattttatcagcttaaaagatgtgagtattaataatattcaaaatttgagt
gtagattttccactacacaatcttgtagcaattacaggcgtttcaggaagtggtaaaagc
tcattaattttacaaactttacttccgtttgcaaaagaagaacttaatcgtgctaaaaaa
gttaaaaaactaagtggggttaaaatagaaggtttagaaaaacttgataaggtgatttat
cttgatcaaagtcctataggaagaactccgcgttcaaatcctgctacttatacaggcgct
atggatgaaattcgtaatctttttgcagctaccaaagaagctaaaatgcgaggctataaa
gcagggcgtttttcttttaatgttaaaggtggaagatgtgaaaagtgtagtggcgatggc
gagattaaaatcgaaatgcattttttacctgatgtgatggtaacttgtgatgtttgtaat
ggtaaaagatataatgatgcaacactagagattaaatataaaggtaaaagcatagctgat
gttttaaatatgagtatcatagaagcaagtgagttttttactttggtgccaaaaatcaag
caaaagcttgatactttagtaaaagttgggcttgattatcttactttaggacaaaatgca
actactttaagtggtggggaggctcagcgtattaagctagctaaagaattaagcagaagc
gatacgggaaaaactctttatattttagatgagcctacaacgggacttcattttgaagat
gttaataaacttattttggttttgcaacatttagttgatcttggaaatagcgtgtttgtg
atagagcataatcttgatgttataaaaaatgctgattatatcatagatatggggccagaa
ggtggagttaaaggtggtaaggttatagctaaaggtagcgttgaagagcttgttaaaaat
cataaaaaaagtggttcttatactgggtattatttaaatttagagttaaaaaataaggaa
gattaa
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