Chryseobacterium lactis: EG342_03455
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Entry
EG342_03455 CDS
T06580
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
clac
Chryseobacterium lactis
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clac03032
]
EG342_03455 (topA)
03400 DNA repair and recombination proteins [BR:
clac03400
]
EG342_03455 (topA)
Enzymes [BR:
clac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EG342_03455 (topA)
DNA replication proteins [BR:
clac03032
]
Prokaryotic type
DNA Topoisomerases
EG342_03455 (topA)
DNA repair and recombination proteins [BR:
clac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EG342_03455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
AZA81017
UniProt:
A0A3G6RNY7
LinkDB
All DBs
Position
complement(806377..808938)
Genome browser
AA seq
853 aa
AA seq
DB search
MSKNLVIVESPAKAKTIQKYLGKDFEVKSSFGHIRDLPKKGMGIDLATFSPDYEVSADKK
KLVTELKAAVKKADMVWLASDEDREGEAIAWHLADELKLKPENRKRIVFHEITKNAILKA
IDNPRDIDQNLVNAQQARRVLDRIVGFEMSPVLWKKVKPGLSAGRVQSVAVRLIVEREKE
IRDFTPKASFKLDGIFLNKTEQEIAAKLKKDFEKEEDAEKFLEQAKTTEFKVLNVETRPG
TRSASAPFTTSTLQQEASSRLGYNVTNTMRLAQRLYEEGFITYMRTDSVNLSQEAIEGAK
KQIISEYGADYSSPRNYTTKSASAQEAHEAIRPTDFGVKSIGDAQLNKLYQLIYRRTLAS
QMSNAKIEKTVIEIGNASLPHHFEAQGEVIIFDGFLKAYGIVKTEEEDDENNEKLLPKVS
VGEILNYKTITATEKFTRPSARYTEAGLVRKLEELGIGRPSTYAPTIQTIQNREYVDKRE
IEPHTREVIKMSLVKDKIKKVVLEEKFGGDKNKFIPTDIGEVVNDFLTDNFREILDYGFT
ARVEEGFDEIANGDQKWKEMMTDFYSKFHPRIEDVEENADRATGDRLLGVDPKTGKNVHA
RIGRFGAMIQIGETDDEEKPTFASLMTGQNIATITFEEAIELFKLPFDLNEFEGQPVSVG
VGRFGPYVKWGDTFISIPKGEDPLSVGQNRAEEIINEKKKADAPIATYKGEPVTKGSGRF
GPFIKYKDIFVNVPKKYNFDNLSQSDINELIDAKLEKEANRYIQQWEKEKISIENGRWGP
FVKFGKAMFKIPKKNDDTKYDAEELKDVSLDDVKKWITDQDKNAFAEKKKPAAKKTTAAK
KTTTAKKPAAKKK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatttagtaatcgttgagtccccggcaaaagcaaaaactattcagaaatat
ttaggaaaggattttgaagtgaaatccagctttggtcatatccgtgatctgcctaaaaaa
ggaatgggtatagacctcgccacatttagtcctgattacgaagtttcagcagacaaaaag
aaattggtaacagaattaaaagccgctgtaaagaaagccgatatggtgtggctggcttcc
gatgaagaccgcgaaggagaggctattgcatggcacctggcggacgaattgaagttgaag
ccggaaaacagaaaaagaattgttttccacgagattacaaaaaacgccattctaaaagct
attgataatcccagagatattgatcaaaatttagtaaacgctcaacaggcgagaagagtt
ttggacagaatcgtaggttttgaaatgtcacccgttttatggaaaaaagtaaaaccgggg
ttatctgcaggaagagtacagtctgtagcggtacgattgattgtagaaagagaaaaagaa
atccgtgactttactccaaaagcaagcttcaaattagacggaatcttcttaaataagact
gagcaggaaattgctgctaaacttaaaaaagatttcgaaaaagaagaagacgcagaaaaa
ttcctggaacaggcaaaaactacagaatttaaagttctgaatgttgaaacaagaccaggt
acacgttctgcatctgccccttttacaacttctacattacagcaggaagcctcttcaaga
ttagggtataatgtgaccaataccatgcgtttggcacagagactatatgaggaagggttt
attacctacatgagaacagactcggtaaacctttctcaggaagcaattgaaggagcgaaa
aagcaaattatatcagaatatggagcagactattcttctccaagaaattatactacaaaa
tcagcttcagcacaggaagctcacgaagcaatccgtcctacggatttcggagtaaaaagt
attggtgacgctcagttgaataaattatatcaattgatctacagaagaacacttgcttct
cagatgtccaatgctaaaatcgaaaaaacggttattgaaattggaaatgcgtcactgcca
catcattttgaagcacagggagaagttattatttttgatggtttcctgaaagcttacggt
atcgtaaaaacagaggaagaggatgatgaaaacaacgaaaagttgttgccaaaggtaagc
gtaggagaaattttaaattataaaacaatcactgccactgaaaaattcaccagaccaagt
gcgagatatactgaagctggactggtaagaaaactggaggaattgggaatcggtagacca
tctacttatgctccgacaattcagacaattcagaacagagaatatgtggacaagcgtgag
attgaaccacacacccgtgaggtgattaaaatgtctctcgtaaaagataagattaaaaaa
gttgtccttgaagagaaattcggaggcgataaaaataaattcatacctacagatatcggt
gaggtcgtaaatgatttcttaaccgataactttagagaaatcctagattatggtttcacc
gcaagagtagaagaaggttttgatgagattgccaacggtgaccagaaatggaaagaaatg
atgactgatttctactcaaaattccatccgagaattgaagatgtagaagaaaatgcagac
cgcgcaacaggagacagacttttgggtgttgatccgaaaaccggtaaaaacgttcacgct
agaatcggtagatttggagcaatgatccagattggggagacggatgatgaggaaaagcca
acttttgcttcattgatgacaggtcagaatatcgctaccatcactttcgaagaagcgata
gagctgtttaaactacctttcgatctgaatgaatttgaaggacagccggtttctgttgga
gtcggaagatttggaccttacgtgaaatggggtgatacattcatcagtattccaaaaggt
gaagatcctctttctgttggtcagaaccgagctgaagaaattattaacgaaaagaaaaaa
gcagacgctccgatcgcaacttacaaaggagaacccgtaactaaaggttcaggcagattc
ggaccgttcatcaaatacaaagacatttttgtaaacgttccgaagaaatataacttcgat
aacctttctcaaagtgatatcaatgagctgatagatgccaaactggaaaaagaagccaac
cgatatattcagcaatgggaaaaagaaaagatttctattgaaaacggaagatgggggcca
ttcgttaaatttggaaaagcaatgtttaaaattccaaagaaaaacgatgataccaaatac
gatgcagaagaattgaaagacgtttcactggatgacgtaaaaaaatggattaccgaccag
gataaaaatgccttcgcagagaagaaaaaacctgcagcaaaaaagacaaccgctgcgaag
aaaacaacaacagcaaagaaacctgctgccaaaaagaagtaa
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