Chryseobacterium lactis: EG342_12030
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Entry
EG342_12030 CDS
T06580
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
clac
Chryseobacterium lactis
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clac03019
]
EG342_12030
03009 Ribosome biogenesis [BR:
clac03009
]
EG342_12030
Messenger RNA biogenesis [BR:
clac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EG342_12030
Ribosome biogenesis [BR:
clac03009
]
Prokaryotic type
rRNA processing factors
EG342_12030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AZA82576
UniProt:
A0A3G6RJ21
LinkDB
All DBs
Position
complement(2679130..2680689)
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AA seq
519 aa
AA seq
DB search
MKKELIVSHEDDLTKIALLEDGRLCELHEQEDKSDFIVGDLFIGKVKKLAPNLNAAFVNI
GYDKDAFLHYQDLGPQYLTYRKFLKDTISKKQSTSSLKNFEIQPEIDKNGTVDKVIAKDD
LVLLQITKEPISTKGPRISTQVSLTGRFLVLIPFDNKVSISKKIRSFEEKERLRTLIDSI
KPEGFGVIIRTVAEGKKVADLHNDMNQLVQKWESTFKNIQRNKVPSKVLSEEDKASAILR
DNFNQDFVNIMCDDEQMVSEMKNYIEVIAPEKKNIVQFYDSHIPLLEYYNVEKQLKQSFG
KHVNIPSSKGAYLVIEHTEALHVVDVNSGNNITTGAAVNKEHALKVNKMAATEIARQLRL
RDMGGIIVIDFIDMPNSEHRRDLYEHLKEEMKRDKARHKILPPSKFGLIQITRQRNRPEK
QIETKEENPNKDGEIVAPIVIVEKMGETLRNILQKEKGKVYLHVHPFVEAYLTKGIKSIQ
MKWFIKYKKWVTIVPRDSFKYLEYKIYNSKKEELIEFSN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagaactaatagtttcgcatgaagatgatcttacaaagattgcactgctggaa
gacggaagactatgtgaacttcatgagcaagaggacaaaagcgattttatagttggagat
ctgtttataggaaaagtaaaaaaactggcccctaacctgaatgcagcattcgtgaatatc
ggatatgataaggatgcttttctgcattatcaggatttaggcccacaatatcttacatac
agaaagtttttaaaagatactatttctaaaaaacaaagcacttcaagcttaaaaaatttc
gagatacaacccgaaatagacaaaaacggaacggtagataaagtaattgcaaaagacgac
cttgttttgctgcagattaccaaagaacctatttctaccaaaggacccaggatttctacc
caggtttctttaacaggacgttttctagttctgatcccattcgacaacaaagtttctatt
tctaaaaagattagaagttttgaagaaaaagaaagactcagaacgctgatagacagtata
aaacctgaaggtttcggagttattatcagaaccgtagccgaaggaaaaaaggtagccgac
cttcacaacgatatgaaccagctggttcagaagtgggaaagcacttttaaaaatatccag
agaaataaagttccgtctaaagttttaagcgaagaagacaaagcttcagctattttaaga
gacaattttaatcaggatttcgtcaatatcatgtgtgatgatgaacagatggtgagcgag
atgaaaaattacattgaagtaattgctcctgagaaaaaaaatattgtccagttttacgat
tcccatattccacttctggaatattataatgttgaaaaacaacttaaacagagcttcgga
aaacacgtaaacattccaagttctaaaggagcttatcttgttattgaacacacagaagca
cttcacgttgtcgatgtcaactccggaaataatattactaccggggccgctgtcaataaa
gaacacgcattgaaagtgaacaaaatggcagctacagagatcgctagacagctacgcctc
cgcgacatgggaggtatcatcgtgatcgattttatcgacatgccaaactctgaacacaga
agagatctctatgagcatcttaaagaggaaatgaagcgcgacaaagctcgccacaaaatc
cttcctccaagtaaatttggtttgatccagatcaccagacaaagaaatcgtccggaaaaa
cagatcgaaaccaaagaagaaaacccgaacaaagacggagaaattgtagctccaattgtt
atcgtggaaaaaatgggtgaaaccttaagaaatattttgcagaaagaaaaaggaaaagtc
tacctgcatgtacacccatttgtggaagcctaccttaccaaaggcatcaaaagtatccag
atgaaatggtttatcaagtataaaaaatgggtaaccatcgtaccaagggattcttttaaa
tatttagaatacaaaatctacaattccaaaaaagaagaattgatagaattctctaattaa
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