Chryseobacterium lactis: EG342_13615
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Entry
EG342_13615 CDS
T06580
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clac
Chryseobacterium lactis
Pathway
clac03030
DNA replication
clac03430
Mismatch repair
clac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EG342_13615
03430 Mismatch repair
EG342_13615
03440 Homologous recombination
EG342_13615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clac03032
]
EG342_13615
03400 DNA repair and recombination proteins [BR:
clac03400
]
EG342_13615
Enzymes [BR:
clac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EG342_13615
DNA replication proteins [BR:
clac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EG342_13615
DNA repair and recombination proteins [BR:
clac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EG342_13615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
DUF6492
DUF2857
Motif
Other DBs
NCBI-ProteinID:
AZA82847
UniProt:
A0A3G6RJ34
LinkDB
All DBs
Position
3037859..3042523
Genome browser
AA seq
1554 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLSDSDNWPRMVQIAWQLHNDDGTLIENQDYIIKPEGYDIPF
NAARIHGITTKIANEEGRDLQEILEEFSKVLERVRVVSGHNVEFDYNIVGAEFYRKNLQD
NLQEKPRADTMLLGTDFCKLGGGRGGRFKPPKLEELYEKLYGNKFDEAHNAAADVNATAQ
VFFEMMRIGVVPAETLKISEDQLSYFKSLYPDPIKPFGIVIRRQVADFHNKKKQQDFGSI
DEIDLGKYFNFDNHSVFSTLTATSSINDLIKKASDENFPAVGMVDLGNMMGAFKFVSAVE
GANGDRAKKHKEYVAKKQEAEENGTEFNEEEPVSEPLIPVVGCEFYISERYEQKQFTKDD
PDRRTQVVLLAKDFNGYKNLAKLSSIGFLKGFYFGVPRISRELISQYKEGIIALTSGILG
DIPDAILNTGEQKGEELFKWWKDTFGDDFYVQLQNHKLPEEEHLNEVLLYLADKYNVKIL
AQNQTFYTNKDDANIQDIISCIKDGEKQTTPIGKGFGKRRGLATGEYYIKNSDEIKEAFL
AYPDAFDAYEEFFAKFKPYTLKRDVLLPKFDIPQEFIHVEDDLDGGKRGEMAYLTHLTYE
GARKRYLDTGITDEIKERLDFELEVIANTGYPGYFLIVQDFCNEARNMGVWVGPGRGSAA
GSAVAYCIGITNVDPIKYDLLFERFLNPERVSMPDIDIDFDDEGRDRVIKWVIEKYGQNQ
VAQIITYSVLGGKSAIKDAGRVLDVPIPDTNNIAKLIPSTPGMNIAKALAKYDKLKPEEQ
MLVDEMRYVLQSPDDARHGVLASAKKMEGCIRNTGIHACGVIITPEDVSNLVPVTIAAKD
ADILVSQFDNSVAESAGLLKMDFLGLRTLTIIKDAIKLVKARYGLDIDPDLIPLDDVKTY
QLFKEGRTVGIFQYESPGMQKYMRELKPTVFADLIAMNALYRPGPIKYIPNFINRKHGIE
EIVYDLPETEEYLKETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKQIDVLNKMY
PKFIEGGRKNNLNEERLEKIWNDWKAFAEYAFNKSHSTCYAFIAYQTAYLKANYPAEYMA
SVMSNNINNTDSITMFMEDCKSMGVDVLGPDVNESQYKFSVNEKGQIRFGLGAIKGIGEG
PSEGITRERENGRFKNIYDFFERILPSQMNKRVAESLVLAGAFDELSSFHRGQYFDIDLA
GKTNLERLIRYGQSFQESKNEMEHSLFADFAEEVQIEQPKLAPCPEWPNMHKLNKEKEII
GFYLSAHPLDEFKYHFQFMQGQLSKKAVLEKGEEEKTTDTVPVLEEDSQEETVDLVEIVS
DELATGEEEVVEEVTKKAEPKGNFLFLNLDEVDAYKEQAFANKQEELFEEKKKDWKTIQK
ERENGGGGKEYTVAGLITEYRVQDGFRSGEKVAFVTLEDYSGSYSFRLGDRDYMRLKEKL
EVQRFVIFKIKFAQVKDGRVFVNVNDVIELQEAFERFAKSISLVMDVMDVRPEDLDFFRT
VLDRNKGNQKLKFFIKNIEDDSQIEVQSMKHSVDLNGDLIKEIQLLNKYEFYLN
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgacacagaaacaaccggtttaccaaaaaatttcaacgcaccgctt
tcagactcggataactggccaagaatggttcagattgcatggcaattgcataatgatgat
ggaacgttgattgaaaaccaggattatattataaagccagagggctatgatattcccttt
aatgcagcaagaattcatggaattaccactaaaattgccaatgaagaagggcgcgatctg
caagaaatcttagaagaattttccaaagttctggaaagggtgagagtcgtttccggacac
aacgtagaatttgattacaatatcgtaggcgcagaattttacagaaaaaatttacaagat
aatctccaggaaaaaccaagagcagatacgatgcttttaggaactgacttttgtaaattg
ggaggtggccgaggtggccgatttaagcccccgaaattggaggaactttatgaaaagttg
tacggaaataaatttgatgaagcccataatgcagcagccgacgtaaatgctacagctcag
gttttctttgaaatgatgagaatcggggttgttcccgcagaaacactgaagatttctgaa
gaccagttaagttatttcaaaagtctttatcctgatccgattaagccattcggaattgtt
atccgaagacaggttgcagattttcataataagaaaaagcaacaggattttggaagtatc
gatgaaattgatttaggaaagtatttcaattttgataatcatagtgttttttcaacgtta
acggctacttcaagtattaatgacttgataaagaaagcttctgatgaaaatttcccggcc
gtcggaatggtggatcttgggaatatgatgggagcattcaagtttgtttctgccgtggaa
ggagccaatggtgatcgtgctaaaaaacataaagaatatgtagccaaaaagcaggaagca
gaagaaaacgggactgaattcaatgaagaagaacctgtttctgagcccttgattcctgtt
gttggttgtgaattttatatttcagaacgttacgaacaaaaacagtttaccaaagatgat
ccggacagaagaacacaagtagtacttttggcaaaggattttaacggatataaaaattta
gcaaaactttcgagtatcggtttcttaaaaggattctattttggagttccaaggattagc
cgtgaattgatctcacagtataaagaaggaattattgctctgacatcgggcatcctcgga
gatatcccagatgcgatcctgaataccggtgagcaaaaaggggaagagttattcaaatgg
tggaaagatacctttggagatgatttctatgtgcagcttcaaaatcataaactgcccgaa
gaagaacacttgaatgaggttcttttgtatctggcagataaatataatgttaagatttta
gcgcagaatcaaaccttctataccaataaagatgatgccaatatccaggatattataagt
tgtatcaaagacggtgaaaagcagacaacacccatcggaaaaggctttggaaaaagaagg
ggacttgcaacaggcgagtattacattaaaaattctgatgaaataaaagaagcatttctg
gcttatcctgatgcatttgatgcgtatgaagagttttttgccaagtttaaaccttatact
ttaaaaagagatgttcttcttccgaagttcgatattccacaagaatttattcatgtagag
gatgatctggatggtgggaaaagaggggagatggcttatcttacgcatcttacctacgaa
ggagcgagaaaaagatacctcgatacgggtattacagacgagattaaagaacgtctggac
tttgagctggaagtaattgccaataccggttatcccggatacttccttattgttcaggat
ttctgtaatgaagcccgtaatatgggagtatgggttggtcccggaaggggatctgcagca
ggatctgcagttgcttactgtatcggaattaccaatgttgaccctattaagtatgatctc
ctttttgagagattcctgaacccggaaagagtctcgatgcccgatattgatatcgacttt
gatgatgagggacgagacagggtaattaaatgggtaattgaaaaatacggtcagaaccag
gttgcgcagattattacctattcggtgcttggtgggaaatcggcaattaaagatgccgga
agagtactggatgttccgattcctgatacgaataatattgccaagctgattccttctaca
ccggggatgaatattgcgaaagcgttggcgaaatatgataaattaaaacctgaagaacag
atgcttgtcgacgagatgaggtatgttcttcagagtcctgatgatgcccgacatggtgta
cttgccagtgccaagaaaatggaagggtgtatcaggaatacggggattcacgcctgtgga
gtaattattactccggaagatgtgagtaacctggtaccggtcactattgctgcaaaagat
gctgatatcttggtgtcgcagttcgataactctgtggcggaaagtgcgggacttctgaag
atggatttccttggtcttaggactctgacaattattaaagatgctataaaacttgttaaa
gcaagatatgggctagatattgatccggatcttattccattggatgatgtcaaaacatac
cagttgtttaaggaaggaagaacagtcgggattttccagtatgaaagtcccggaatgcaa
aaatatatgagggagcttaagcctacggtttttgccgaccttattgccatgaacgcattg
taccgtccgggtccgatcaaatatatcccgaactttattaatagaaagcatgggattgaa
gagattgtttatgacttaccggaaacagaagaatatttaaaggaaacttacgggattacc
gtttatcaggagcaggtaatgcttctgtctcagaaactggctaactttacgaagggggaa
gccgataccctgagaaaggcaatgggtaaaaagcagattgatgttctgaataaaatgtat
cctaaattcatcgaaggcggaagaaaaaataacctcaacgaagaaaggctggaaaaaatc
tggaacgactggaaagcctttgcagaatatgccttcaacaaatctcactctacctgctat
gctttcattgcttaccaaacggcgtatctgaaggctaattatccggcagaatatatggcc
agtgtaatgagtaataacattaacaatacggattcgattaccatgttcatggaggattgt
aaaagtatgggagttgatgttttggggcctgatgttaatgaatctcaatataaattttca
gtaaatgaaaaaggacagattcgtttcggattaggagctatcaaaggaattggtgaagga
ccaagtgagggaattacccgagaaagggaaaacggaaggtttaaaaatatttacgatttc
tttgaaagaatattgccttctcaaatgaataaaagagtggcggaaagtttagtgctggcc
ggagcttttgacgagttaagctctttccacagaggtcagtattttgatattgatttagct
ggaaaaacaaatcttgaaagactgatcagatacggtcagagttttcaggaaagtaaaaac
gagatggagcattcgttatttgcagattttgctgaagaagttcagattgagcagccgaag
ctggcaccttgccctgaatggcctaatatgcataaattgaataaggaaaaagaaatcatc
ggtttctatctttctgcccatccgctggatgaatttaaatatcacttccagtttatgcag
ggacagctttccaaaaaggcggttcttgaaaaaggagaggaagaaaaaacaacagataca
gttcctgttttagaagaagattcacaagaggaaacggttgatcttgttgaaattgtttct
gacgaattggctaccggagaagaagaggtggtggaagaggtgaccaagaaagcagagcca
aaaggtaatttcttattcctgaatctggatgaggtggatgcttataaagaacaggcgttt
gctaacaaacaggaagaattatttgaagagaagaaaaaagactggaaaacaattcaaaaa
gaaagagagaacggcggtggcggaaaagagtacactgttgcaggcttgatcacggaatac
agagttcaggatggcttcagaagtggtgaaaaggttgcttttgttaccctggaagattat
tccggttcatactctttcaggttgggagatcgtgattatatgagattaaaagaaaagctc
gaagttcagaggtttgttatttttaaaataaaatttgctcaggtgaaggacggtagagtt
ttcgttaatgtaaatgatgtgatagaactgcaggaagcttttgagagatttgctaaaagt
atttctttggtgatggatgtgatggatgttagacctgaagatctggactttttcagaacc
gtactcgacagaaataaagggaatcagaagcttaaattcttcattaaaaatatagaagat
gattcccagattgaagttcagtcgatgaagcattccgtggatttgaatggagatcttatt
aaagaaattcaacttctcaataaatatgaattttatttgaattag
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