Chryseobacterium lactis: EG342_25195
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Entry
EG342_25195 CDS
T06580
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clac
Chryseobacterium lactis
Brite
KEGG Orthology (KO) [BR:
clac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clac03009
]
EG342_25195 (rimO)
Enzymes [BR:
clac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EG342_25195 (rimO)
Ribosome biogenesis [BR:
clac03009
]
Prokaryotic type
ribosomal protein modification factors
EG342_25195 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
TMF_TATA_bd
Poxvirus_B22R_N
Motif
Other DBs
NCBI-ProteinID:
AZA85001
UniProt:
A0A3G6RQ75
LinkDB
All DBs
Position
complement(5607793..5609094)
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AA seq
433 aa
AA seq
DB search
MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVDAKNRGEVEKVFVTGCLSERYKPDLIKEIPDVDQYFGTRDLPILLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHISTPIEKLVSEAQKLA
KKGTKELILIAQDLTYYGLDLYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTNALLDKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVKEQKFDRLGCFTYSHEENTTAHVLEDNIPQEVKEARVEEIMELQSQ
ISWEKNQEKIGKTFKCVFDRKEGNYFIGRTEYDSPDVDNTVLVSAEDTYISIGEFAEVRI
TSAEEFDLYGELV
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatctgtagggaagaagaaaatcaatgtagtcactcttggatgttccaag
aatgtatacgattctgaagtattaatgagccagctgaaagccaatggcaaagaagtggtt
cacgaagaccgtggtgacatcgttgtaattaatacctgcggatttattgataatgctaaa
gaagaatctatcaatacaattcttgattatgtagatgctaaaaacagaggtgaagttgaa
aaagtattcgttacaggatgcctttctgaaagatacaaaccggatttgatcaaagaaatt
ccggatgtagatcaatatttcggaaccagagaccttccgattctgttgaaacaccttggt
gccgattacaagcatgaattagtaggagaaaggttgacaacaacccctaagcattatgca
tacctaaagatttctgaaggttgtgacagaccatgttctttctgtgcaattcctttgatg
cgaggtggacacatttctacccctattgaaaaactggtttctgaagctcagaaattagcg
aaaaaaggaacaaaagaattaattcttattgctcaggatcttacttattatggtttggat
ctttataaaaaacgtgctttaggagacctgttaaaagaattggtaaaagtagaaggagta
gagtggattcgtctgcattacgctttcccaagtggtttccctgaagatgttttggatatt
atccgtgaagaaccgaaagtttgtaattatatagatattcctcttcagcacatcaattct
gatttgttgaaatcaatgaaaagaggaactactcacgaaaagaccaatgcacttttagat
aaattcagagaaaaagttccggatatggcgatcagaacgacattgatcgtaggatatcct
ggggaaacagaagaaagattccaggagcttaaagattgggttaaagaacagaaattcgac
agattgggatgttttacctattctcatgaagagaataccacggcacacgtcctggaagac
aatattccacaagaagtaaaagaagccagagtggaggagattatggaattgcagtctcag
atctcgtgggaaaagaaccaggaaaaaattggaaaaaccttcaaatgcgtttttgatcgt
aaagaaggaaattatttcattggaagaacagaatatgattctcccgatgttgataacaca
gttctggtatcagcagaagatacttatatctctataggtgaatttgcagaggtaagaatt
acttcagctgaagaattcgacttatacggagaactggtataa
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