Cedecea lapagei: NCTC11466_00089
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Entry
NCTC11466_00089 CDS
T05810
Symbol
gabR_1
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clap03000
]
NCTC11466_00089 (gabR_1)
Transcription factors [BR:
clap03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC11466_00089 (gabR_1)
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GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_36
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
VEB95001
UniProt:
A0A447UWF0
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All DBs
Position
1:complement(91538..93016)
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AA seq
492 aa
AA seq
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MSRKARAVDIPAIGELDRRGGQLSLQLARALKNAIHKGELKSGDLLPSTRVLAKALSLAR
GTVLEAFEQLVAEGFLESRHGSGTRVAYAPESPAPMVKTSRSAPLPLSAQAQAFARVGEQ
LKTLAPKPFAVSVPVGDTAPGDVWRRLGNRIRARGAGAPSGYADPQGARALREAICEYVR
KSRSVRCTPDEVIITSGNQHGLYLTLQILLEAGDSLWMEEPGYPGATSLFETMFRDRTMV
KVAVDDEGLDVELGKKLAPHARAAFVTPSHQYPLGMPLSMSRRAALLEWAQANQAWIIED
DYDSEMRYAGHPFPALQGLGPENVIYLGTFSKILFPSLRLGYAVVPKQLVSAFCGARILM
DRQPPGADQHVLASFISEGHLDRHLRKMRGVYAEKRRVLMAAVEQYISPDVAWLQPCDQG
MHMVLWLRPGLDDHQVVGQAMQAGISVRAVSHMFTPGRQRSGILLGLGGYGDEEIARAVQ
RLNEVLCSSPSG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgtaaagccagagccgtcgatattcccgccatcggcgagcttgaccgccgcggc
gggcagcttagtttgcagttagccagggcgctgaaaaacgccattcataaaggcgagctg
aaaagcggcgatctgctgccgtccacccgcgtgctggcaaaggctttgtcccttgcacgc
ggcacggtgctggaagctttcgaacagctggtcgcggaggggtttctggaatccagacat
ggctccggcactcgggtagcgtatgccccggaaagccccgctcccatggtgaaaaccagc
cgctcggccccgctccccctttctgcccaggcccaggcgttcgccagagtaggcgagcag
ctaaaaacgctggcgccgaagccgtttgccgtttccgtcccggtcggcgataccgcaccg
ggcgacgtatggcgcaggctcggcaaccgtatccgcgcccgcggggctggcgcaccgtcg
ggatacgccgatccgcagggcgcacgagcgctgcgggaggccatctgcgaatacgtcaga
aagtcgcgctcggtgcgctgcaccccggacgaggtcatcatcacctccggcaaccagcac
ggcctctacctgacgctgcaaatcctgctggaggccggggattcgctctggatggaggag
ccgggctaccccggcgcgacttcgctattcgaaacgatgttccgcgaccgcacgatggtc
aaagtcgccgttgatgacgaagggctggacgttgagctgggtaaaaaactggcgccccat
gcccgcgccgccttcgttacgccttcacatcagtacccgctaggcatgccgctcagtatg
tcccgccgtgccgctttgctggagtgggcgcaggcaaaccaggcctggattattgaggac
gactacgacagcgagatgcgctatgcgggccatccgttcccggcgctacagggtctgggg
ccggagaacgtcatctacctcggcaccttcagtaaaatcctcttcccgtccctgcgcctt
ggctatgccgtggtgccaaagcagctggtttcggccttttgcggggcgcgcatcctgatg
gacaggcagccccccggtgccgatcagcacgtgctggctagctttatctccgagggccac
ctcgaccgccacctgcgtaaaatgcgcggcgtttacgccgagaagcggcgggtgctgatg
gcggcagtagagcaatacatctctcccgacgtcgcctggctgcagccctgcgatcaggga
atgcatatggtgctttggctgcgccccggcctggacgaccatcaggttgttgggcaggcg
atgcaggccggtatttccgtccgcgcggtgtcgcatatgtttacgccaggcaggcaaagg
tccggcattttgctggggctgggcggctacggtgacgaagagatcgctcgcgccgtgcag
cgcctgaatgaagtgctatgctccagcccctcgggttga
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