Cedecea lapagei: NCTC11466_00854
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Entry
NCTC11466_00854 CDS
T05810
Symbol
apxIB_2
Name
(GenBank) RTX-I toxin determinant B
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
clap
Cedecea lapagei
Pathway
clap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC11466_00854 (apxIB_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clap02000
]
NCTC11466_00854 (apxIB_2)
02044 Secretion system [BR:
clap02044
]
NCTC11466_00854 (apxIB_2)
Transporters [BR:
clap02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
NCTC11466_00854 (apxIB_2)
Secretion system [BR:
clap02044
]
Type I secretion system
Adhesin protein transporter
NCTC11466_00854 (apxIB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
ABC_ATPase
AAA_29
Dynamin_N
PIG-F
RsgA_GTPase
AAA_23
MMR_HSR1
AAA_25
NACHT
Peptidase_C39
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VEB95726
UniProt:
A0A3S4MDC8
LinkDB
All DBs
Position
1:complement(843975..846176)
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AA seq
733 aa
AA seq
DB search
MSQTAPPAGEFLSEQALAQWAHAISHVAGHYRVVCSPGTIQANAPWFKDKTKVAALTQLS
RQAGLSFHPLGITEKAISQWRLPVVVDLANGQTAVIEQFDGEDTVDICYFDDERHTNRQS
LSKLLPEIRFVAALRPLSALKDSRVDAYISRFSPDWMKELIMLDVRPYGPVMLAAFWVNV
LSLAGILFSMQVYDRVIPAQSYPTLYVLATGVLIAVVFGFILKVTRSNIMDVLGKRADMR
ISDRVFSHALRLRNSAVPRSTGSFISQLRELEQIREMITSSTISTIVDLPFFLLFVGVLA
IIAPQLAWIAPVAAIVMVLPGLLLQKKLATLANQAAHESTLRNAVLVESVQGLEDIKLMQ
AENRFLQQWNSYIRITAESGLKTRELTQGLISWGITIQSLVFVIVVLFGAPLVIEGEMTT
GAMVAASMLASRMIAPMANLCGVLARWQQVKAAKQGLDSIMQLPVETQRDENLIHKDIFH
GHYLFESAQFKYHSEDPRIPLRIARLEIQRGERIAVLGRNGAGKSTLLQALAGGVDLASG
EARLDDLAMSQIDMADLRRNIGFLSQNARLFYGTLRENLTLGAPHASDDAIFEVLEVSGA
SNFVKHLPKGLDHPIMEGGNGLSGGQRQSILLARMLLRSPNIVLLDEPTASLDDHTEREF
IQRLNQWLGHRTLVVATHRVPVLELVERVLVLKDGQLVMDAPKAQALGAARPAQAPAAAQ
TPPREWNNENQSA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagccagacagcccctcccgccggggaatttttaagcgagcaggcccttgcccagtgg
gcccacgccataagccatgttgccgggcattaccgcgtggtttgctcgcccggcaccatt
caggccaacgcgccctggttcaaagataaaaccaaagttgccgcgctgacccagctttcg
cgccaggccgggctctctttccaccctctcggcatcaccgaaaaagcgatatctcagtgg
cggctgccggtggtggtggacctggccaacggccagaccgcggtgatcgagcagtttgac
ggcgaagacaccgtagacatctgctacttcgacgacgaacgccacaccaaccgtcagtcg
ctcagcaagctgctgccggagatccgctttgtggccgccctgcgtccactctctgccctg
aaagacagccgcgtcgacgcctacatctcacgcttcagcccggactggatgaaagagctg
attatgctcgacgttcgtccttacggcccggtaatgctggcggccttctgggtgaacgtg
ctgtcgctggccgggatcctgttctcaatgcaggtgtacgaccgggtgatccctgcccag
tcatacccgacgctctacgtgctggcgaccggcgtgctgatcgccgtggtgttcggcttc
attcttaaagtcacgcgaagcaacatcatggacgtgctgggtaaacgggccgatatgcgt
atttccgatcgcgtattcagccacgctctgcgcctgcgcaacagcgccgtaccgcgctcc
accggcagctttatttctcagctgcgcgagctggagcagatccgcgagatgatcacctcc
tcgaccatctccacgatcgtcgatctgccgttcttcctgctgtttgtcggcgtgctggcg
atcatcgcgccgcagctggcgtggatcgccccggtagcagccattgtgatggtgcttccc
ggcctgctgctgcagaagaagctcgccacgctggccaaccaggctgcccatgaatccacc
ctgcgcaacgccgtgctggtggaaagcgtccaggggctggaggacattaagctgatgcag
gcggagaaccgcttcctccagcagtggaacagctacatccgcattaccgctgaatctggc
ctgaaaacccgtgaactgacccaggggttgatcagctggggcatcaccattcagagcctg
gtgttcgtcatcgtggttctgttcggcgcgccgctggttatcgaaggcgaaatgactacc
ggggcgatggttgccgcctcaatgctggcctcaaggatgattgccccgatggcgaacctg
tgcggcgtgcttgcccgctggcagcaggtaaaagccgccaagcaggggctggacagcatt
atgcagctgccggtggaaacccagcgcgatgaaaacctcatccacaaggacatcttccac
gggcactacctgtttgaaagcgcgcagttcaaatatcacagcgaggatccgcgcattccg
ctgcgcatcgcccgccttgagatccagcggggcgaacgcattgccgtgctcgggcgtaac
ggcgcgggtaaatccacgctgctgcaggcgctcgccggcggcgtcgatctggccagcggc
gaagccaggctcgacgatctcgctatgtcacaaatcgacatggcggatctgcgtcgtaat
attggcttcctgagccagaacgcccgattgttctacggtacgctaagagaaaacctcacc
ctcggcgctccgcacgccagcgacgatgcgatcttcgaggtgctggaagtcagcggcgcg
agcaactttgttaagcatctgccgaaggggctcgatcacccgatcatggaaggtggcaac
gggctttccggcggccagcgtcagtcgatcctgctggcgcgtatgctgcttcgctcgccc
aacatcgtgctgctcgatgaacccaccgcctcgctggacgaccacaccgaacgcgaattt
attcagcggcttaaccaatggcttgggcaccgtacgctggtggtcgctacccaccgcgtg
ccggtgctcgagctggtcgaacgcgtgctggtgctgaaagatggccagcttgtgatggat
gcccctaaggctcaggcgctcggcgccgcaagaccggctcaggcaccggccgccgcccag
acaccaccgcgggagtggaacaatgaaaaccagtcagcatga
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