Cedecea lapagei: NCTC11466_01267
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Entry
NCTC11466_01267 CDS
T05810
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clap03016
]
NCTC11466_01267 (truA)
Enzymes [BR:
clap01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NCTC11466_01267 (truA)
Transfer RNA biogenesis [BR:
clap03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11466_01267 (truA)
Prokaryotic type
NCTC11466_01267 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
VEB96117
UniProt:
A0A3S4KSR6
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All DBs
Position
1:1281795..1282610
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AA seq
271 aa
AA seq
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MSEVLSEIPLHKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPINVFCAGRT
DAGVHATGQVVHFETSAVRKDAAWTMGVNTNLPGDIAVRWVKDVPAEFHARFSATARRYR
YVIYNHRLRPAVLQQGVTHFHLPLDADRMHRAAQSLLGENDFTSFRAVQCQSRTPWRNMM
HITVNRYGAYIVVDIKANAFVHHMVRNIVGSLMEVGCGNQDETWMADLLAMKDRTKAAAT
AKAEGLYLVSVDYPDRFALPCLPMGPLFLAD
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtgctcagcgaaattccgcttcataaaatcgcgctcggcattgagtacgac
ggcagtaaatattacggctggcaacgtcagaacgaagtgcgtagcgtgcaggaaaagctg
gaaaaagcgctttcccaggtggcgaatgagcccattaacgtcttttgtgcaggccgcacc
gatgctggcgttcacgctaccggccaggttgtgcactttgaaacctctgccgtacgcaag
gacgcagcctggacgatgggcgtaaatacgaatttgcctggtgacatcgccgtgcgttgg
gtaaaagatgtgccagccgaatttcatgcccggttcagcgccacagctcgccgttatcgc
tacgtgatttataatcatcgcctgcgtccggccgtgttacagcaaggagtaacccatttt
cacctgcctctggatgcggacagaatgcaccgcgccgcgcagagtctgctgggagaaaat
gattttacttcgtttcgtgctgtgcagtgtcagtcccgcaccccatggcgcaatatgatg
cacattacggtaaatcgctacggcgcatacatcgtggtggacattaaggccaacgctttt
gtgcatcatatggtgcgcaatatcgtcggcagtctgatggaagtgggctgcggtaaccag
gatgagacctggatggctgacctgctggcaatgaaggaccgaacaaaggccgcggctacc
gcaaaagcggaagggctgtacctggtgtcggtagattaccccgaccgctttgcgctgccg
tgtctcccgatggggccgctttttttagccgactga
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