Cedecea lapagei: NCTC11466_01369
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Entry
NCTC11466_01369 CDS
T05810
Name
(GenBank) type I restriction enzyme EcoKI subunit R
KO
K19789
DNA repair protein RadD
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_01369
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
NCTC11466_01369
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
zf-tcix
Zn_Ribbon_1
SLFN-g3_helicase
DZR
UPF0547
AAA_16
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
VEB96216
UniProt:
A0A447UZU4
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Position
1:complement(1384621..1386381)
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AA seq
586 aa
AA seq
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MSFTLRPYQQEAVDATLSYFRKHAEPAAIVLPTGAGKSLVIAELARVARGRVLVLAHVKE
LVAQNHAKYVALGLEADIFAAGLQRKESQGKVVFGSVQSVARNLEHFHGEFSLLIVDECH
RIGDSDESQYQQILTHLRSNNPKLRLLGLTATPYRLGKGWIYQFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQPNGLFSEADLNRELKQQKRITPH
IISQIVEFAAERRGVMIFAATVEHAKEITALLPASDAALITADTPGPARDTLIEAFKNQQ
FRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKKDCLILDYAGNP
HDLFTPEVGNAKGKSDNVPVQVFCPSCGFANTFWGKTTADGKVIEHFGRRCQGWFEDDDG
LREQCDYRFRFKNCPNCNAENDIAARRCHQCDHVLVDPDDMLKAALKLKDALVLRCSGMT
LHHGGDAKGDWLKITYYDEDGADVSERFRLQTPAQRMAFEQLFIRPHSRAPGVPLRWINA
ADVVAQQELLRHPDFVVARKNGQFWNVREKVFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttactctacgcccatatcagcaagaagccgtggacgccaccctcagctacttc
cgtaaacacgctgagccggccgcgatcgtgctccctaccggtgcgggaaaaagtctggtg
atagcggagcttgcgcgagtggctcgcgggcgggtactggtgcttgctcacgtaaaagag
ctggtggcacaaaaccacgccaaatacgttgcccttgggctggaagcggacatctttgcc
gccgggctgcagcgcaaggagagtcagggaaaagtggtttttggcagcgttcagtctgtt
gcccgcaatcttgaacattttcacggcgagttctctctgctgattgtcgatgaatgccat
cgcatcggcgacagcgacgagagccagtatcagcaaatcctcacccatcttcgcagtaac
aacccaaaactgcggctgctggggttgaccgccacgccctaccgcctcggcaagggctgg
atttatcaatttcactatcacggcatggtccgaggcgatgaaaaggcgctgttccgcgac
tgcatctatgagctgccgctgcgctacatgatcaagcatggctacctgacgccgccggaa
aggctcgacatgccggtggtgcaatacgacttcagccgtctgcaggcgcagcccaacggg
ctattcagcgaagcggacctgaaccgcgagcttaagcagcaaaaacgcatcacgccccat
atcatcagccagatcgttgagtttgccgccgagcggcgtggcgtgatgatcttcgccgct
acggtagagcacgccaaagagatcaccgccctgcttcccgccagcgacgcggccctgatt
accgccgacacgcccggcccggcgcgcgatacgctgattgaagcctttaaaaatcagcag
ttccgctttctggtgaacgttgcggtcctgaccaccggctttgatgcgccgcacgtggat
ctgatagctatcctgcgccctaccgagtcggttagcctttaccaacaaatcgttggccgc
ggcctgcgcctgtcaccgggcaaaaaagattgcctgatcctcgactacgccggtaatccg
cacgatctctttaccccggaagtgggcaacgccaaaggcaaaagcgacaacgtgccggtg
caggtgttttgcccttcctgcgggtttgccaataccttctgggggaaaacgaccgcagac
ggcaaagtcattgaacactttggccgccgctgccagggctggtttgaggacgacgacggc
ctgcgcgagcagtgcgactaccgcttccgcttcaagaactgccccaactgcaatgcggaa
aacgatatcgccgcccgccgctgccatcagtgcgaccacgtgctggtcgacccggacgat
atgcttaaagcagccctgaagctgaaagatgcgctggtgctgcgctgcagcgggatgacg
ctacatcacggtggagatgctaaaggtgactggctgaaaattacctattacgacgaagac
ggggcagacgttagcgagcgcttccgtctccagacaccggcccagcgcatggcgtttgaa
cagctttttattcgcccccactcacgcgcgcccggcgtgccgctacgctggataaacgcg
gctgacgttgtcgcccagcaggagttgctacgccacccggatttcgtggttgcccgtaag
aatggccagttctggaacgtacgtgaaaaggttttcgactatcagggtcgcttccgccgg
gccaatgaattgcgtggttaa
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