Cedecea lapagei: NCTC11466_01434
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Entry
NCTC11466_01434 CDS
T05810
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clap03009
]
NCTC11466_01434 (rimO)
Enzymes [BR:
clap01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NCTC11466_01434 (rimO)
Ribosome biogenesis [BR:
clap03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC11466_01434 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
VEB96280
UniProt:
A0A3S4J1Q5
LinkDB
All DBs
Position
1:complement(1455638..1456963)
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AA seq
441 aa
AA seq
DB search
MSNVTQQPRIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKVDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
QHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGDVLAEAKR
LVEAGVKELLVISQDTSAYGVDVKHRTGFWNGAPVKTSMVSLCEQLAKLGVWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLQRIKQWREICPDLTL
RSTFIVGFPGETEEDFEMLLDFLKEARLDRVGCFKYSPVDGATANELPDQVPEEVKEERW
NRFMQLQQKISAERLQEKVGREILVMVDEVDEEGAIGRSMADAPEIDGAVYLNGETKLKP
GDVVRVKVENADEYDLWGSVV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtgacccaacagccccgtatcgggtttgtctccctcggctgcccgaaaaac
ctcgtggactccgaacgcatcctgactgaactgcgcaccgaaggttatgacgtggtgcca
agctatgacgacgccgacatggttatcgtcaacacctgcggctttatcgacagcgccgtg
caggaatcactggaagccatcggtgaagcgctgaacgaaaacggtaaggtgattgttacc
ggctgcctgggtgccaaagtggatcagatccgtgaagtgcatccgaaggtgctggaaatc
actggccctcacagctacgagcaggttctggagcatgttcaccactacgtgccaaaacct
cagcacaacccgttcctgagccttgtcccggaacagggcgtaaagctcacgccgcgccac
tacgcttatcttaaaatttccgaaggctgtaaccatcgctgcaccttctgcattatcccg
tcgatgcgtggcgatctggacagccgtcccatcggtgacgtcctggctgaagcaaaacgt
ctggtagaagccggcgtgaaagagctgttagtcatctcccaggatacttctgcctacggc
gtggacgtgaagcaccgcaccggtttctggaacggcgcaccggtcaaaaccagcatggtt
agcctgtgcgagcagctcgctaagctgggcgtctggactcgtctgcactacgtttacccg
tacccgcacgttgacgatgtgatcccgctgatggcggaaggcaaaatcctgccgtacctg
gacatcccgctacagcacgccagtccgcgcattctgaagctgatgaagcgtcctggctct
gcggatcgccagctgcagcgcatcaagcagtggcgtgaaatctgcccggatttgaccctg
cgttcgacctttattgtcggcttcccgggtgaaaccgaagaagacttcgagatgctgctc
gacttcctcaaggaagcgcgtctggatcgcgttggctgcttcaagtacagcccggttgac
ggcgcaacagccaacgagctgccggaccaggtgccggaagaagtgaaagaagagcgctgg
aaccgctttatgcagctgcagcagaagatctctgccgagcgcctgcaggagaaagtaggc
cgcgagattctggtgatggttgatgaagtagacgaagaaggcgccatcggccgcagcatg
gctgacgcgcctgaaatcgacggcgcggtttatctgaacggtgaaacgaagctgaagcca
ggcgacgtggtccgggtgaaggttgagaatgcggatgagtacgatctgtggggatcggtg
gtttaa
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