Cedecea lapagei: NCTC11466_01580
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Entry
NCTC11466_01580 CDS
T05810
Symbol
lasR
Name
(GenBank) Transcriptional activator protein lasR
KO
K19734
LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
Organism
clap
Cedecea lapagei
Pathway
clap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11466_01580 (lasR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clap03000
]
NCTC11466_01580 (lasR)
Transcription factors [BR:
clap03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NCTC11466_01580 (lasR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_20
HTH_11
KLHL33-like_BTB_POZ
HTH_38
Motif
Other DBs
NCBI-ProteinID:
VEB96419
UniProt:
A0A447V0H2
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All DBs
Position
1:1611048..1611752
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AA seq
234 aa
AA seq
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MAIHVKDSYYNDSVVNSLIQSELEEFVLDYKHTTYAYAVMNKKDPSQMRIINNNPQWFNI
YLENKYQFIDPVIVRSLSCVEDFSWDSGMMVSSGYTLKRIFDEGSQHNIFQGHTFPLHDY
VNNLAVLSLISHHPGGVNLTTNRASVLAFFIQLHQKMLNLYSDIRLKKNVFLSPREQQIL
QWVYAGKTYAEIATILSITERTVKFHMGNAMKKLGVNNARHAVKLSIELRLLDV
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccatacacgtgaaggattcgtattacaatgacagcgtagtaaactcgttaatccaa
agcgagcttgaggaatttgtgctggattacaagcatacgacctacgcgtatgcggtaatg
aataagaaagacccatcgcagatgcgtattattaataacaatccgcaatggtttaacatc
tacctcgagaacaaatatcagtttatcgacccggtcattgtgcggtcgttaagctgcgtg
gaggatttttcctgggatagcggcatgatggtctcttccggctatacgctaaaacgcata
ttcgacgaaggatcgcagcataatatcttccagggacatactttcccgctgcatgattac
gttaataatcttgcggtattatcgcttatcagccaccatcccggcggcgtcaacctgacg
accaatcgtgcgtcggtgctcgccttctttattcagctccaccaaaaaatgctgaatttg
tacagcgatattcggctgaagaaaaacgtctttctgtcgccgcgggagcagcaaattttg
cagtgggtctacgccggtaaaacctatgcggagatagcgacgatcctttcaatcaccgag
cgaacggtaaaatttcacatgggtaatgcgatgaaaaagctgggcgttaacaatgctcgc
cacgcggtaaaactaagcattgagctaaggctgctggacgtctga
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