Cedecea lapagei: NCTC11466_01826
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Entry
NCTC11466_01826 CDS
T05810
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clap03016
]
NCTC11466_01826 (rnd)
Enzymes [BR:
clap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NCTC11466_01826 (rnd)
Transfer RNA biogenesis [BR:
clap03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NCTC11466_01826 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
VEB96797
UniProt:
A0A3S4JYQ1
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All DBs
Position
1:1847011..1848120
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AA seq
369 aa
AA seq
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MITTDEGLAAVCQAARQFPALALDTEFVRTRTYYPQLGLIQLYDGQQASLIDPLTISDWS
PFKALLQDPDTIKYLHAGSEDLEVFLNAFGVLPEPFIDTQILASFTGRPLSCGFATLVES
YTGIALDKSESRTDWLARPLTARQCEYAAADVLYLLPIAEKLMAETEAAGWINAALDECQ
LMCARRREQLDPEEAWREIGNAWQLRTRQLACLRKLAAWRLRKARERDMAVNFVVREEHL
WQVARYMPGSLGELDSLGLSGSEIRFHGKTLVALVAEAQVLPESELPQPLQNLVDMPGYR
KVFKAIKALVQEISEAKGLSAELLASRRQINQLLNWHWKLKPQSVEPELISGWRAELMAE
ALTKLLTEY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgattaccaccgatgaagggctggctgccgtatgccaggccgctcgtcagttccccgcg
ctggcgctggatactgaatttgtccgtacgcgcacctattatccgcaattaggcctgatc
cagctttatgacggccagcaggcttcgctgatcgatcctctcaccatcagcgactggtcg
ccattcaaagcgctgctgcaggatcctgacaccataaagtaccttcacgcgggcagcgag
gatcttgaagttttcctgaatgccttcggcgtactgcccgagccgtttatcgatactcag
atcctggcttcgtttaccgggcgtccgctctcctgtggttttgccaccctcgtggagtcc
tacaccggtattgcgctggataaaagtgagtcccgcaccgactggctggcgcggccctta
acggcgcggcagtgtgagtatgcggcggcagacgtgctctatctgctgcctattgctgag
aagctgatggccgaaacggaagcggctggctggatcaacgccgctctcgatgaatgccag
ctgatgtgcgcccgccgccgtgaacagcttgacccggaagaggcctggcgtgaaatcggc
aatgcatggcagcttcgcacccggcagctggcctgcctcaggaagctggccgcgtggcgc
ctgcgcaaagcgcgtgagcgggatatggcggtgaactttgtcgttcgcgaagagcacctc
tggcaggtggctcgctatatgccagggtcgctcggggagcttgactcgcttggcctgagc
ggcagtgaaatccgtttccacggtaaaacccttgtcgcgctggtggcggaggcccaggtc
ctgccagagagcgagctgccgcagccgctgcagaacctggtggatatgcccggttaccgc
aaagtctttaaggcgattaaggcgctggtgcaggagataagtgaggcaaaagggctgagt
gcagaattgctggcctcccgtcgccaaataaaccagctgctcaactggcactggaaattg
aaaccccaaagcgttgagccggaattaataagcggctggcgtgccgaattaatggccgag
gcgctgactaaactgctgacggaatactaa
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