Cedecea lapagei: NCTC11466_01885
Help
Entry
NCTC11466_01885 CDS
T05810
Symbol
gmr_1
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
clap
Cedecea lapagei
Pathway
clap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11466_01885 (gmr_1)
Enzymes [BR:
clap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NCTC11466_01885 (gmr_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
GGDEF_2
Pro-rich_19
Motif
Other DBs
NCBI-ProteinID:
VEB96918
UniProt:
A0A447V194
LinkDB
All DBs
Position
1:1900557..1902548
Genome browser
AA seq
663 aa
AA seq
DB search
MKDDAEQNLLYRYLGTSSPYWRLPADSNALQLAASEDSDTGRVVALEPAQADEIRQMTVI
TSSLTMTLSLFGTEVPVHMVGRKVSKREWAGTASAWHDTRSVARDLVQGLSFAEQVVSEA
NSVIVILDKQGNIQRFNRLSEEYTGMKEHEVIGQNVFRLFMSRSEAAASKRNISGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIYDLIADAIEKREEAQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEEGQVLARLGGDEFIVLATNTSQGSLEAMSSRILTRLKQPFRIGLIEVYSGCSLGI
SLAPQHGEERENLIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITCRGEVRSLEALVRWQSPERGLIPPLDFISYAEESGLIVPLGRWVMVSVV
QQVAKWRKSGINLRVAVNVSARQLADQTLLSDLKQALKDLNFDYCPIDVELTESCLIENE
ELALSVIKQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDVHKHSVSQSLV
RAIVAVAQALNLQVIAEGVENQKEDAFLTRNGVNERQGFLFAKPMPAAVFERWFKRYRAS
TKG
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatgcagagcagaacctgctttatcgttatctggggacgagcagcccctac
tggcgtttaccggctgacagtaacgccctacaactggcggccagtgaagattctgacacc
ggtcgggtcgtggcgctggaacctgcgcaggcagacgaaattcggcagatgacggtgatc
acttccagcctgaccatgacgctgtcgctgttcggcaccgaggtaccggtgcatatggtg
ggccgaaaagtgtcaaaacgtgaatgggcaggcaccgcatcggcctggcacgatacccgt
tcggtggcgcgagatctggtgcagggcctctcttttgcagagcaggtggtctctgaagcc
aattccgtaatagtgatccttgataaacagggaaatattcagcgcttcaaccggctaagt
gaagagtacaccgggatgaaagagcacgaggtcatcggccagaacgttttcaggctgttt
atgagccgcagcgaagccgccgcctcaaagcgcaatatcagcggttttttccgcaacggc
agctcctatgaggtcgaacggtgggtaaaaacccgaaaaggccagcggctgtttttattc
cgcaataagtttgtgcacagcggcagcggcaaaaacgaaatctacctgatttgctccgga
accgacatcaccgaagagcgccgtgctcaggagcgcctgcgggtgctggcgaatacggat
acgatcaccggcttgccaaaccgcaacgccatttacgatctgatcgccgacgccatagag
aagcgtgaagaggcccaggttggcatcgtctatctggatctcgataactttaaaaaagtg
aacgatgcctacggccacatgtttggcgatcagctgctgcaggccgtttcactggcgatt
ttaagctgccttgaagagggccaggtgctggctcgcctcggcggtgatgaatttatcgtg
ctggcgaccaacacctcgcagggctcgctggaggcgatgtcctcccgcattttaacccgt
ctgaaacagcccttccgaatcggcctgattgaggtctatagcggctgttcgctgggcatt
tctcttgccccgcagcatggcgaggagcgagagaacctgattcgcaatgccgatacggcc
atgtacacggcaaaagagagcggccgcggtaagttttgtgtgttttcgccggagatgaat
cagcgggtctttgagtatttgtggctcgataccaatctgcgcaaagcgctggataacgac
cagctggtgatccactaccagccgaagataacctgccgaggcgaagtccgtagcctggag
gcgctggtacgctggcagtccccggagcgcgggctgatccctcctctggactttatctcc
tacgccgaagagtccggcctgattgtgcctctgggccgctgggtgatggttagcgttgtg
cagcaggtggcgaagtggcggaagagcggcatcaatctgcgcgtggcggttaacgtttcg
gctcgccagcttgccgaccagactctccttagcgacctcaaacaggcgctgaaagatctg
aatttcgactactgcccgatcgacgttgagctgaccgaaagctgtcttattgagaatgaa
gagctggcgctctcggtcattaagcagttcagccagttgggggcgcaggtccatctcgat
gacttcggcaccggctattcatctctatcgcagctggctcgctttcctatcgatgcgatt
aagctggatcagtcttttgtgcgcgacgtgcataagcattcggtctcccagtcgctggtc
agggctattgtagccgttgcccaggcgctcaatttgcaggtcattgctgagggagtggaa
aatcaaaaagaagacgccttccttaccaggaacggcgtcaacgaacggcagggtttttta
ttcgcgaaacctatgcccgcagccgtattcgagcgatggtttaaacgctaccgggccagt
acaaaaggctag
DBGET
integrated database retrieval system
