Cedecea lapagei: NCTC11466_01905
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Entry
NCTC11466_01905 CDS
T05810
Symbol
topA_2
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clap03032
]
NCTC11466_01905 (topA_2)
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_01905 (topA_2)
Enzymes [BR:
clap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC11466_01905 (topA_2)
DNA replication proteins [BR:
clap03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11466_01905 (topA_2)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11466_01905 (topA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
DUF3700
Motif
Other DBs
NCBI-ProteinID:
VEB96951
UniProt:
A0A447V1B7
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All DBs
Position
1:complement(1920488..1923085)
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSTTKKSADSAAAKGTKKVN
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDTRYSRVVFNEITKNAIRQAFEKPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEYWEIDANLSTPKGDALPVQVSH
HKDKPFRPVNREQTMAAVSLLEKARYTVLDREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGHITYMRTDSTNLSQDAVSMVRGYIEESFGKKYLPADANQYASKDN
SQEAHEAIRPSDVTVQAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVEAGEY
RLKARGRTLRFDGWTKVMPALRKGDEDRTLPAVEPGEELTLVELLPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMENSLDQVANNQAEWKGVLDNFFSDFSGQLEKAEQDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLVPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
RMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELHRFRDRLPEKLRYLADAPQEDPEGNKAFVRFSRKTKQQYV
ASEKEGKATGWSAFFVDGKWVVAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgtcatcgttgagtccccggcaaaagccaaaacgatcaacaaatat
ctcggaaatgactacgtggttaaatccagcgtcggccatatccgcgatttgccgaccagt
ggatcaaccaccaagaagagcgctgactctgccgccgccaaagggaccaaaaaggtcaat
aaggatgaacgcggagcgctcgtcaaccgcatgggtgttgatccatggcataactgggac
gctcactacgaagtgctgccgggcaaggagaaagtggtctccgagctgaaatctctggca
gaaaaagcagaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgcg
tggcacctgcgggaagtgatcggtggtgatgacacgcgctacagccgcgtcgtgtttaac
gaaattaccaaaaatgcaattcgccaggcgtttgaaaagccgggtgagctgaacatcgac
cgtgttaatgcccagcaggcgcgccgctttatggaccgcgttgtgggctacatggtgtca
ccgctgctgtggaaaaagattgcgcgtggcctctccgcggggcgcgttcagtccgtggcg
gttcgcctggtggtcgagcgggaacgagaaattaaagcgttcgtgccggaagagtactgg
gaaatcgacgcgaatctctctacgccgaagggcgatgcgctgccggtgcaggttagccac
cataaagacaaacctttccgtccggtgaaccgcgagcagaccatggcggcggtcagcctg
cttgaaaaagctcgctacaccgtgctggaccgtgaagacaagccaaccagcagcaagccg
ggggcgccattcatcacctccacgctgcagcaggctgccagcacgcgtcttggttttggc
gtgaagaaaacgatgatgatggcacagcgtctttatgaagcgggccacattacctacatg
cgtaccgactccaccaacctgagtcaggatgcggtgagcatggtgcgcggctatatcgaa
gagagcttcggtaagaaatacctgcctgctgacgccaaccagtacgccagcaaggataac
tctcaggaagcgcacgaagcgattcgtccttccgatgtaaccgtgcaggctgaatcgctg
aaagatatggaagcggatgcccagaagctttatcagctgatctggcgccagtttgtggcc
tgccagatgacgcccgcgaagtacgactctaccacgctgacggtagaggccggcgagtat
cgcctgaaggcgcgtggccgtacgctgcgctttgacggctggacgaaggttatgcccgcg
ctgcgtaaaggcgatgaagaccgcacgttacctgccgtggagccaggcgaggagctgacc
ttagttgagctgcttccggctcagcactttaccaaaccgcctgcacgttttagtgaagcg
tctctggtcaaagagctggaaaagcgcggcattggtcggccgtctacctacgcttctatt
atatccaccattcaggaccgcggttacgtacgcgtcgagaaccgtcgtttctacgccgaa
aaaatgggtgagatcgttaccgaccgcctggaagaaaacttccgtgagctgatgaattac
gacttcactgcgcagatggaaaacagcctcgaccaggtggcaaacaatcaggccgaatgg
aaaggcgtgctggataacttcttcagcgatttcagcggccagcttgagaaagctgagcag
gatccggaagagggcggcatgcgcccgaaccagatggttctgaccagtatcgactgtcca
acctgcgggcgtaaaatggggatccgtaccgcgagtaccggcgtattcctcggctgttca
ggctatgcgttaccgccgaaagagcgctgcaaaaccaccatcaacctggtaccggagaac
gaagttcttaacgtgctggaaggggatgatgcggagaccaacgccctgcgcgccaaacgc
cgctgccagaagtgcggcacggcaatggacagctaccttatcgatccgaagcgcaagctg
catgtttgtggtaataacccgacctgcgacggctatgaaatcgaagaaggtgagttccgc
atcaaaggctatgatggcccaatcgttgagtgcgagaagtgcggctcggaaatgcacctg
agaatggggcgtttcgggaagtacatggcctgtaccaacgacgagtgcaaaaatacccgt
aagatcctgcgtaacggtgaagtagcgccgccgaaggaagatccggttccgctgccggag
ctgccttgcgagaaatcagatgcctatttcgtgctgcgcgatggggctgccggggtattc
ctcgcggcaaacaccttcccgaaatctcgtgaaacgcgtgcgcctctggttgaagagctt
catcgcttccgcgatcgtttgcctgagaaactgcgttacctggccgatgcgcctcaggaa
gatcctgagggaaacaaagcgttcgtgcgctttagccgcaaaacgaagcagcagtacgtt
gcctccgaaaaagagggcaaagcgaccggctggtccgccttcttcgtcgacggtaagtgg
gttgtagctaaaaaataa
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