Cedecea lapagei: NCTC11466_02148
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Entry
NCTC11466_02148 CDS
T05810
Symbol
dbpA
Name
(GenBank) ATP-independent RNA helicase dbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clap03009
]
NCTC11466_02148 (dbpA)
Enzymes [BR:
clap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NCTC11466_02148 (dbpA)
Ribosome biogenesis [BR:
clap03009
]
Prokaryotic type
rRNA helicases
NCTC11466_02148 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Helicase_C_2
CMS1
Helicase_RecD
HK97-gp10_like
AAA_22
adh_short
Motif
Other DBs
NCBI-ProteinID:
VEB97406
UniProt:
A0A3S4JBJ6
LinkDB
All DBs
Position
1:2155122..2156495
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AA seq
457 aa
AA seq
DB search
MTAFSALNALPEAQLANLSELGYHEMTPVQEAALPAILAGKDVRAQAKTGSGKTAAFGLG
LLQHIDASQFLTQSLVLCPTRELADQVAKELRRLARYMPNIKILTLCGGQPFGVQRDSLQ
HAPHIIVATPGRLLDHLKKETVKLDALQTLVLDEADRMLDMGFADAIDEVIAHAPVKRQT
LLFSATWPAAIAAISGRIQRDPQTIEIDTVDELPSVEQQFYEVSRGGKIGLLLTLLSKHQ
PASCVVFCNTKKDCQAVCDALNERNQSALALHGDMEQRDRDQTLVRFANGSSRVLVATDV
AARGLDIKALEMVINYELSWDPEVHVHRIGRTARAGQSGLAISFCAPEEAQRASVLAEML
NLSLKWQPVPSGGSVKPLEAEMATLCIDGGKKAKMRPGDILGALTGDMGLEGADIGKIDV
HPIHVYVAVRQSVARHAWKQLQQGKIKGKSVKVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgctttttccgcactgaacgctttacctgaagcacaactcgccaaccttagcgaa
ctggggtatcacgaaatgacgcccgttcaggaagcggcactgcccgccattctggccgga
aaagatgtccgtgcgcaggcaaaaaccggcagcggcaaaacggccgcgttcggactaggc
ctgctgcagcatattgacgccagccagtttttaacccagtcgctggtgctctgcccgacg
cgcgagctggccgaccaggttgctaaagagctgcgccgtctggcccgttatatgccgaat
atcaaaattttgaccctgtgcggcggccagccgtttggcgtgcagcgcgactcgctgcag
catgcgccgcacattatcgtcgccacgccaggccgcctgctggaccacctgaaaaaagag
acggtgaagctggatgccctgcaaacgctggtgctggatgaagccgaccgtatgctggat
atgggctttgccgacgcgattgacgaggttattgcccacgcgccggtaaaacggcagacg
ctgcttttctccgccacatggccagccgccattgccgccatcagcggccggatccagcgc
gatccgcaaactatcgagatcgacaccgttgatgagctaccgtccgttgagcagcagttc
tatgaagtctcgcgcggcggcaaaattggcctgctgctgacgctgcttagcaaacaccag
cccgcttcctgcgtggtcttctgcaataccaaaaaagattgtcaggcggtttgtgacgcg
ctgaacgagcgtaatcaaagcgcgttagcgctgcacggtgatatggagcagcgagaccgc
gaccagacgctggtgcgttttgccaacggcagcagccgtgtgctggtggcaacagacgtt
gcggcgcgtggtttggatatcaaagcgctggaaatggtcattaactacgagctgtcgtgg
gatccggaagttcacgtccaccgtattggccgtaccgcacgtgcgggacaaagcgggctg
gctatcagcttctgtgcgccggaagaggcgcagcgcgccagcgtgctggcggaaatgctg
aatctttcgctgaagtggcagccggtgccgtccggcggaagcgtgaagccgctggaggca
gaaatggccacgctctgcatcgacggcggtaagaaagccaaaatgcgtccgggcgatatt
ctgggcgcgttgacgggagatatggggctggaaggcgcggacatcggcaaaattgacgtc
cacccaattcatgtctacgtcgctgtgcgccagtcggtggcgcgtcacgcgtggaagcag
ctgcagcaagggaaaattaaaggcaagtcggtgaaggttcgcctgctgaagtaa
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