Cedecea lapagei: NCTC11466_03030
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Entry
NCTC11466_03030 CDS
T05810
Symbol
msbA_1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
clap
Cedecea lapagei
Pathway
clap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NCTC11466_03030 (msbA_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clap02000
]
NCTC11466_03030 (msbA_1)
Enzymes [BR:
clap01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
NCTC11466_03030 (msbA_1)
Transporters [BR:
clap02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NCTC11466_03030 (msbA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
DEAD
HUTI_composite_bact
AAA_16
nSTAND3
DUF87
ABC_membrane_2
APS_kinase
AAA_30
AAA_22
AAA_29
AAA_25
RsgA_GTPase
AAA_18
Wzy_C
Cytidylate_kin
AAA_15
Activator-TraM
MMR_HSR1
G-alpha
NB-ARC
Sigma54_activat
AAA_5
Motif
Other DBs
NCBI-ProteinID:
VEB99143
UniProt:
A0A3S5DPU9
LinkDB
All DBs
Position
1:complement(3060460..3062208)
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AA seq
582 aa
AA seq
DB search
MQNDKDLSTWQTFRRLWPMISPFRTGLIVAGIALILNAASDTYMLSLLKPLLDDGFGKTD
SSVLLWMPLAVIALMVLRGITSYVSSYCISWVSGMVVMNMRRRLFSHMMGMPVAFFDQQS
TGTLLSRITYDSEQVASSSSSALITVVREGASIIGLFVLMFWYSWQLSVILIVLAPIVSF
AIRFVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQQVETDRFDKVSNRMRNQ
GMKLVSASSISDPIIQLIASFALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEIDSGKKVIERSKGDVEFRNVTFTYPGRDVPALR
DINLTIPAGKTVALVGRSGSGKSTIASLITRFYEQEKGDILIDGHDIRDYTLASLRNQVA
LVSQNVHLFNDTIANNIAYARTEQYSREDIEKAARMAYAMDFISKMDNGLDTMIGENGVL
LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLS
TIEQADEIVVVEDGRIVERGPHQELLAHRGVYAQLHKMQFGE
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacgataaagatctctccacgtggcagactttccgccggctctggccgatgatt
tccccatttagaacgggtctgattgtggctgggatagcgttaatccttaatgctgcgagc
gatacctatatgctttcgctgcttaaaccattactggatgatggttttggtaaaacggac
tcgtcagtgctgctgtggatgccgctggcggtgattgccctgatggtgctgcgcggcatc
accagctatgtctccagttactgtatctcatgggtgtctggcatggtggtgatgaacatg
cgccgccgcctgttcagccatatgatgggcatgccggtcgccttcttcgatcagcagtca
acgggcacgctgctgtcgcgcattacctatgattctgagcaggtagcctcttcctcctcc
agcgcgctgattaccgtggtgcgtgaaggcgcctctatcattggcctgtttgtgctgatg
ttctggtatagctggcagctgtcggtcatcctgatcgtgctggccccgatcgtctcgttt
gctattcgcttcgtttctaagcgcttccgcaacatcagtaaaaacatgcagaacaccatg
gggcaggtgacaaccagcgccgagcagatgctgaagggccataaagaagtgcttatcttc
ggcggccagcaggtggaaaccgatcgcttcgacaaggtgagtaaccgcatgcgtaaccag
gggatgaagctggtttcggcctcctctatctccgacccgatcatccagcttatcgcttcg
tttgctttggccttcgtgctgtatgccgccagtttcccaagcgtcatggaaaccctcacg
gcggggacgatcaccgttgtcttctcttcaatgattgcgctgatgcgcccgctgaaatcg
ctgactaacgtgaatgctcagttccagcgcgggatggccgcctgccagacgctgttctct
atcctcgattccgagcaggaaatagacagcggcaaaaaggtcatcgaacgttctaaaggc
gatgttgaattccgcaatgtcacctttacctacccaggccgtgatgttccagcgctgcgc
gacatcaacctgactattccggcaggcaagaccgttgctctggttgggcgttcaggttcc
ggtaagtcgactattgccagcctgatcacgcgtttctacgagcaggaaaagggcgacatc
ctgattgatggtcatgatattcgcgactatacccttgcttctctgcgtaaccaggttgca
ctggtctcccagaacgttcacctgtttaacgacactatcgccaataacatcgcctacgca
cgcaccgagcagtactcgcgcgaagacattgaaaaggccgcgcgtatggcctatgccatg
gacttcatcagtaagatggataacgggcttgataccatgatcggtgaaaatggcgtgctg
ctttccggcggccagcgtcagcgtatcgcgattgcccgagctctgctgcgggatagccca
atattgattctggacgaagcgacttccgcacttgataccgagtcagaacgcgccattcag
gccgctctggacgaattgcaaaagaaccgtacttcgctggttatcgcccaccgtctgtct
actatcgaacaggcagacgagatcgtggtggtggaagatggccgcatcgttgaacgtggc
cctcaccaggagctgctggcgcatcgcggtgtctacgcccagctgcataagatgcaattt
ggcgaatga
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