Cedecea lapagei: NCTC11466_03259
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Entry
NCTC11466_03259 CDS
T05810
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_03259 (phrB)
Enzymes [BR:
clap01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC11466_03259 (phrB)
DNA repair and recombination proteins [BR:
clap03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC11466_03259 (phrB)
Prokaryotic type
NCTC11466_03259 (phrB)
BRITE hierarchy
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
VEB99585
UniProt:
A0A447V4Y1
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All DBs
Position
1:complement(3296341..3297750)
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AA seq
469 aa
AA seq
DB search
MSTHLVWFRNDLRVHDNYALHAACRSPDAKVIGIFVVTPEQWHQHVMAPKQAEFIFEHLQ
ALGHALAGRGIELHIRQVADFTASVACIKDFCAEQNVGALFYNYQYEVNERARDAAMEKA
LEGKVTLQGFDDSLLLAPGSVTTGNQEMYKVFTPFSKAFIRRLQEGLPECVPAPKARGEV
HFNEHFDFDVPREAFDRDIFPAGEQEAIGMLRKFCLQPAADYQEQRDFPAIEGTSRLSPY
LAIGVLSPRQCLHRLLKEHPKALEGEAGATWLNELIWREFYRHLIVAYPKLCRHRPFIAW
TDNVRWSEDEALLEAWKQGKTGYPIVDAAMRQLNTTGWMHNRLRMVVASFLVKDLLIDWR
HGERYFMSRLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDADGRFIRHWLP
ELQQVPGKHIHSPWDWAAKQKRTLDYPRPIVDHKQARLKTLAAYEAARK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccatcttgtctggtttcgcaacgatcttcgtgttcacgataactacgcctta
cacgccgcctgccggagccctgatgcaaaagtcatcgggatatttgttgttacgccagag
cagtggcatcagcatgtcatggcgccaaagcaggcagaatttatctttgagcatctgcag
gccctgggtcatgcgcttgccgggcgcggcattgaacttcatatcaggcaggtcgctgat
ttcacagcatcggtggcatgcataaaagatttttgcgccgaacaaaacgtcggggcgctt
ttttacaactaccagtacgaagtcaacgagcgtgcccgcgacgctgctatggaaaaagcc
cttgaaggtaaagtcaccctacagggatttgatgacagccttttgctggcgcccggtagt
gtgaccaccggcaaccaggagatgtataaagttttcacccctttcagcaaggcatttatt
cggcgtttgcaggaaggtctgccggagtgcgtgcctgcgcccaaagctcggggagaggtc
cacttcaacgaacattttgacttcgatgtgccacgtgaggcgtttgaccgcgacattttc
ccggcaggcgagcaggaagcgattggtatgctgcgcaagttctgcctgcagccggccgcc
gactatcaggagcagcgggatttcccggctatcgaagggaccagtcgtctgtctccctat
ctggctatcggcgttttgtctccacgccagtgcctgcatcgcttgctcaaagaacacccc
aaagcgctggagggcgaggccggtgcgacctggcttaacgagctgatctggcgggaattt
taccgccacctgatagtggcttaccccaagctttgccgtcaccggccgtttattgcctgg
actgataacgttcgctggagcgaagatgaagcgctgctcgaggcctggaagcagggcaaa
accggctatccgattgtcgatgcggcgatgcgtcagctgaataccacgggctggatgcat
aatcgcttacgcatggtggtggcgagtttcctggtaaaggatctgctgatcgactggcgg
cacggcgagcgctactttatgtcccggctgattgacggtgacctggcggccaacaacggt
ggctggcagtgggccgcctctaccgggaccgacgccgccccctatttccgtatttttaac
cccaccactcagggggaacgcttcgacgccgacggccgctttatccgccactggctgccg
gaacttcaacaggttccgggtaaacatatccattcgccgtgggactgggcggctaagcaa
aagcgaacgctggactacccgcgtccgattgttgaccataagcaggctcgactgaagacg
cttgcggcctatgaggcggcaaggaaataa
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