Cedecea lapagei: NCTC11466_03561
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Entry
NCTC11466_03561 CDS
T05810
Symbol
sbcD
Name
(GenBank) Nuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_03561 (sbcD)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11466_03561 (sbcD)
Archaeal homologous recombinant proteins
NCTC11466_03561 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
VEC00297
UniProt:
A0A3S4IJY7
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All DBs
Position
1:3542155..3543372
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AA seq
405 aa
AA seq
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MRILHTSDWHLGQNFYTKSRASEHQAFLDWLLNAALEHQVDAIIVAGDIFDTGSPPSYAR
EMYNRFVVQLQATGCQLVVLAGNHDSVATLNESRELLACLNTRVIASARHQKAEQALLLN
QKDGTPGAVLCPIPFLRPRDIQSSQAGLSGHEKQRSLMEAISEHYQQCYEAAVALRGDRA
LPIVATGHLTTVGVTKSDAVRDIYIGTLDAFPAQHFPPADYIALGHIHRAQKIGGSEHIR
YSGSPIPLSFDETGKAKSVFLVEFSGAALAGVEALEVPISQPLAIVKGSLREIEQQLEQW
RSAPAEPKVWLDIEIATDEYLHDMQRQVQALTDELPVEVVLLRRSREQRERVIASQHKET
LSELSVEEVFERRLSQEETSDERAARLRTLFAQTLSDLHQQEEQA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctccacacatcagactggcacctcggccaaaatttttacaccaaaagccgg
gcttcagaacaccaggcctttctcgactggctgctaaacgccgcgctggagcatcaggtg
gatgccattattgtcgcgggagatatctttgataccggctcgccgccgagctatgcacgc
gaaatgtataaccgctttgtggtgcagctgcaggccaccggctgccagcttgtggtactg
gcgggcaaccatgactccgtggccacgcttaacgaatcccgcgagctgctggcctgcctg
aatacccgagtgattgccagcgctcgtcaccaaaaagcggagcaggcgctgctccttaat
caaaaagacggcaccccgggcgctgtcctctgccctattcctttcctgcggccacgcgat
attcaaagcagccaggccggcctgtccggccatgaaaaacagcgctccttaatggaggcc
atcagcgaacattatcagcaatgctatgaggcagccgttgccctgcgcggcgacagagcg
ctgcccattgtcgccaccgggcacctgaccaccgttggcgtaacgaaatctgatgcggtt
cgtgacatctatattggcacgctggatgctttcccggcccagcacttcccgcctgccgac
tacatcgcactcgggcatattcatcgcgcgcagaaaatcggcggcagcgagcatattcgc
tacagcggctcaccgattccgctgagcttcgacgaaaccggcaaagcgaaaagcgttttt
cttgtcgagtttagcggcgctgcactggcaggcgttgaagcgctggaagttccgatcagc
cagccgctggccatcgtcaaaggctcgctgcgtgagattgagcagcagcttgagcagtgg
cgcagcgcccctgccgaaccgaaagtctggctggatatcgaaatcgctaccgacgaatat
ctgcacgacatgcagcgccaggtccaggcgcttaccgacgagctgccagtcgaagtcgtt
ctgctgcgccgcagccgtgaacagcgcgaacgggtgattgccagccagcataaagagacc
ctaagcgagttaagcgttgaagaggtttttgagcgacggctgagccaggaagagaccagc
gacgagcgtgccgcgcggttaaggacgctgtttgcacaaaccctttcagacttgcaccag
caggaggaacaggcatga
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