Cedecea lapagei: NCTC11466_03562
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Entry
NCTC11466_03562 CDS
T05810
Symbol
sbcC
Name
(GenBank) Nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_03562 (sbcC)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC11466_03562 (sbcC)
Archaeal homologous recombinant proteins
NCTC11466_03562 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_ATPase
T2SSE
nSTAND3
ABC_tran
cobW
AAA_21
MobB
NTPase_1
GTP_EFTU
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
VEC00299
UniProt:
A0A3S4MG60
LinkDB
All DBs
Position
1:3543369..3546524
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AA seq
1051 aa
AA seq
DB search
MKILSLRLKNINSLKGEWKIDFTQEPFASNGLFAITGPTGAGKTTLLDAICLALYHKTPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGVGYRAFWSQNRARNAANGNLQAPRVELAQIS
DGKILADKIKDKLEIVASLTGLDYDRFTRSMMLSQGQFAAFLNADANDRASLLEELTGTE
IYGTVSAAVFENHKQIKSRLENLLAQAAGVALLSEEQQQQLTESLQTLTLEEKTRSAEQK
QQQQHQQWLSQRIRLATDKEQKQLALNGANQALKDAEPLLARLTRALPAEKLRPHWQRLQ
EKQQVLKQNGEAAEKVNTRLHQLAVRRQQTRRLAAEQAQQLQSEAQQVQAWLTAHDHYRL
WAAELTGWRMAFTQQQRDERQLSELQQALLASQQKLQAMPAPTLTLSPEEVSAHLQKMVA
TRPARQQLAALQPQFSALEKRKTEQQRELKELEKLIAERDVELTQKRQQYKDKRQHEADL
EKVVEQERRIQSLEAERALLQPDSPCPLCGSTQHPSVEAYKTLEPGENQQRLAALKQEVA
KLAELGFALKGQLDTQRQQREKLLQASAALQEEEASLSARWQQQCADSGIALTPEDDLTA
WLDEQEQREQQLRQLGERQALEAQYQRDSQQHEKLNADFVAQRASLQSALEQAGLQRPEP
GEEQSWLTARQQESQQWQQQQDKLPQLRQRLSSLEMLLATLVDDGSTPPQLEEAERQAAL
QNWQTLHNDCNLLEGQRQSLQQQLKQSEAEATASQEQFSAALQASQFSDEADFRSALLEE
AERLELEQRKQQLERQLQQTTTLLEQAESALAQHLSARPENLSEETELSVLEERIATLTL
QLRENASRQGQISQQLRHDEENRVRQQGLMLEIKACEAQAEDWGYLNSLIGSKEGDKFRK
FAQGLTLDNLVWLANNQLNRLHGRYLLQRKDNEALELQVVDTWQADAVRDTRTLSGGESF
LVSLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDTLNASGKTIGVISHV
EAMKERIPVQIKVKKINGLGVSRLDKAFAVD
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttaagcctgcggttaaaaaacattaactccctgaaaggcgaatggaaaatt
gattttacccaggagcctttcgccagcaacggtctgtttgctatcaccggtccgacgggc
gcgggcaaaacgactttgctggacgccatttgcctggcgctttaccacaagacgccgcgc
ctcaataccgtttcgcagtcgcaaaacgatctgatgacgcgggacaccgcagagtgcctg
gctgaagtggaatttgaggtcaaaggcgttggctatcgtgctttctggagccagaaccga
gctcgcaacgcggcaaacggcaaccttcaggcaccgcgcgtggagctggcccaaatcagc
gacggcaaaatcctcgcggataaaatcaaagacaagcttgagattgtcgcctcgctgacc
gggctggactacgaccgcttcacccgctcgatgatgctctcccaggggcagttcgccgcc
tttttaaacgccgatgccaacgaccgcgcctcgctgctcgaagagctgaccggcacggag
atttacggcaccgtgtccgcggcggtgtttgaaaaccataagcaaatcaaaagccgtctg
gaaaacctgctggcgcaggcagcaggcgttgcgctgctgagcgaagagcagcagcaacag
ctgacagagagtttgcagacgctcactcttgaagagaaaacgcgctctgcagagcagaaa
cagcagcagcaacatcagcagtggcttagccagcgaatccggctcgccaccgataaagaa
cagaaacagctcgcgttaaacggcgcaaatcaggccttgaaagacgcggaaccgctgctt
gccagactcaccagagcgctaccggcggaaaaactgcgtcctcactggcagcggctgcag
gaaaaacagcaggtgttaaagcaaaacggtgaagctgcggaaaaagtgaatactcgctta
catcagctcgccgttcgtcgccagcaaacccgccgcttagccgccgaacaggctcagcag
cttcagtcggaagcccagcaggtgcaggcgtggctcacggcccatgaccattatcgcctg
tgggccgccgagctgacgggctggcgtatggcgtttacgcagcagcagcgcgatgaaaga
cagctttctgagctgcagcaggcgctgctggccagccagcaaaaactgcaggcgatgccc
gcccctaccttgacgctctccccagaggaagtaagcgcccatttacaaaaaatggtggca
acccggccagctcgccagcagctggccgccctgcagccgcagttttcagcgctggagaaa
cgcaaaaccgagcagcaacgggagctgaaagagctggagaagcttattgctgagcgcgac
gttgagctgacccaaaaacgtcagcaatacaaagataaacgccagcacgaagccgatctg
gaaaaagtcgtcgagcaggaaagacgcatacaaagccttgaagccgagcgcgcactttta
cagcctgactctccatgcccgctttgtggctcaacccaacatccgtctgttgaagcctat
aagaccctggagccgggcgagaatcagcagcgtcttgccgcccttaaacaagaggtggca
aaactcgcagagcttggctttgccctaaaaggtcagcttgatacccaacgccagcagcgc
gaaaagctgctacaggccagcgccgcgcttcaggaagaggaagcttcgctttcggcccgc
tggcagcagcagtgcgcagactcaggcatcgcgttaacgcctgaggacgatctcaccgcc
tggctcgacgagcaggaacaacgagagcagcagctgcgccagcttggcgaacgtcaggcc
cttgaagcgcaatatcaacgcgacagccagcaacatgaaaagctgaacgcagactttgtg
gcgcagcgcgcttcgctacaatcggcgctggagcaggctggtcttcagcgtcccgagccg
ggtgaagagcaaagctggctcacggctcgccagcaggaatctcagcagtggcaacagcag
caggataaactgccgcagcttcgccagcggctttccagccttgaaatgttgctcgcaacc
ctggtggacgacggctcgacgcctccgcagcttgaggaggccgagcgccaggctgcgcta
caaaactggcagacattgcataacgactgcaatctccttgaaggccagcgtcagtctctg
caacagcagctaaagcaaagcgaggcagaagccaccgcatcgcaagagcagttcagcgcc
gcgctccaggccagccagttcagcgatgaagccgacttccggagcgctctgctggaggag
gccgagcgtctcgaacttgagcaacgcaaacagcagctggagcgccagctacagcagacg
acgaccttgctggaacaggccgaaagcgcgctggctcagcatctctcggcgcgtccggaa
aacctgagtgaagagacggaacttagcgtgctggaggagcgtatcgccacgctcactctc
cagttgcgtgaaaacgcttcccgccaggggcaaatcagccagcagctgcgtcacgacgag
gaaaaccgggttcgccagcaggggctgatgctggagataaaggcttgtgaagcgcaggcg
gaagactggggctacctcaattcgcttatcggttccaaagaaggggataaattccgtaag
ttcgcccagggactgacgctggataatctcgtctggctggcaaacaatcagcttaatcgc
ctgcacgggcgctatctgcttcagcgcaaagataatgaggcgctcgaactgcaggtcgtt
gatacctggcaggcagatgcggtgcgggatacacgtaccctctccggcggcgaaagcttc
ctggtgagcctggcgctggcgctcgctttatcagatcttgtaagccataaaacccgcatt
gattccctgttcctcgatgaaggctttggcacccttgatgcgcagacgctggataccgcc
ctggatgcgctggatacgctgaatgccagcggcaaaaccatcggcgtgatcagccacgtt
gaggcaatgaaagagcggatcccggtgcagattaaggtgaagaaaattaacggattgggc
gttagccgactggataaggcttttgcggtggattga
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integrated database retrieval system
