Cedecea lapagei: NCTC11466_03743
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Entry
NCTC11466_03743 CDS
T05810
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
clap
Cedecea lapagei
Pathway
clap03030
DNA replication
clap03430
Mismatch repair
clap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11466_03743 (dnaE)
03430 Mismatch repair
NCTC11466_03743 (dnaE)
03440 Homologous recombination
NCTC11466_03743 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clap03032
]
NCTC11466_03743 (dnaE)
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_03743 (dnaE)
Enzymes [BR:
clap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11466_03743 (dnaE)
DNA replication proteins [BR:
clap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11466_03743 (dnaE)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11466_03743 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
VEC00643
UniProt:
A0A3S4MHT8
LinkDB
All DBs
Position
1:complement(3738597..3742079)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGSGHGA
GIKPIIGADFNVANELLGDELSHLTVLAANNEGYQNLTLLISRAYQRGYGAAGPIIDRDW
LVELNEGLILLSGGRMGDIGKSLLRGNLPLVDQCLAFWQQHFADRFYLELIRTGRVDEEN
YLHAAVALAEERGLPVVATNDVRFLDAGDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGEMTTEDFLVMKSKEGL
EERLEFLFPDPEVRAEKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIDHVSE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDDQGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGAIKNGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLSPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGHFLDLFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
ALGDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVIPWPDQVVLEGERETLGLY
LTGHPINQYLKEIERYVGGMRLKEMHPTERGKVTTAAGLVIASRVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTARELMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRVDARARLRFGATWRVSPSD
RLLNDLRTLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcattcaccttcgggtgcacagcgactattccatgattgatggg
ctggctaagaccggaccgctggtaaaaaaagccgcggcgctgggcatgcctgcgcttgct
atcaccgatttcaccaacctttgcgggctggtaaaattctacggttccggccatggcgcc
ggcatcaagccgatcatcggcgcggatttcaacgtggctaacgagctgctgggtgacgaa
ctgagtcatctgacggtgctggccgcgaacaatgaaggctaccaaaacctcaccttactg
atctcccgagcctatcagcgcggctacggcgccgcaggcccgatcatcgatcgtgattgg
ctggttgagctgaatgaaggtttgatcctgctgtccggtgggcgcatgggggatattggc
aaaagcctgcttcgtgggaacctgccgctggtcgatcagtgtctggcgttctggcagcag
cattttgccgatcgcttctatctggaactgatccgcaccggccgggttgacgaagagaac
tatctccacgctgccgtggcgctggccgaagaacgcggcctgccggtagtggctaccaac
gacgtccgctttctcgatgctggcgactttgatgcgcatgagatccgcgttgctatccac
gatggcttcacgctggacgatcctaagcgcccgcgtaactactccgctcagcagtacatg
cgtagcgaagaagagatgtgcgagctcttctcggacatcccggaagcgctcgaaaacagc
gtcgaaatagccaagcgctgcaacgtcaccgtgcgcctcggcgagtacttcctgccgcag
ttcccgacgggggagatgaccaccgaagacttcctggtcatgaagtccaaagagggactt
gaagagcgtcttgagtttctgttccccgacccggaagttcgtgccgaaaaacgccccgaa
tatgacgaacgtctggatatcgagctgcaggttatcaaccagatggggttccccggctac
ttcctgatcgtgatggagtttatccagtggtctaaggataacggcgtgccggtagggccg
gggcgtggctccggtgcaggttcgctggtggcctatgcgcttaaaattaccgacctcgat
ccgctcgagtttgacctgctgttcgaacgtttccttaacccggaacgtgtttcgatgcct
gacttcgacgtcgacttctgcatggaaaaacgtgaccaggttatcgaccacgtgtcggag
atgtatggtcgtgaagccgtttcgcagatcattaccttcgggacgatggcggcgaaagcg
gttatccgtgacgtaggccgcgtgctcggccacccttacggctttgtcgatcgtatttcc
aagctggtgccaccagatcccggcatgacgctggcgaaagcctttgaggccgagcctcag
ctgccggagatctacgaggctgacgaagaggttaaagcgctgatcgatatggcgcgtaag
ctggaaggcgtcacgcgtaacgccggtaagcacgccgggggcgtggttatcgcgccgaca
aaaattaccgattttgcgccgctttactgcgacgatcaggggcagcaccctgttacccag
tttgataagaacgacgttgagtatgcgggcctggtgaagtttgacttcctgggactgcgt
acgctgacgatcatcgactgggcgctgaaaatgatcaacccgcgccgggcaaaacagggg
ctggagccgattgatatcgctgccatcccgctggaagacaagaaaagcttcgacatgctg
cagcgctcggagaccaccgcggtcttccagcttgaatcccgcggcatgaaggaccttatc
aaacgtctgcagcctgactgcttcgaagatatgatcgccctggtggccctgttccgtcct
ggcccgcttcagtcggggatggtagataacttcatcgaccgtaagcacgggcgggaagag
atctcctacccggacgtgcaatggcagcacgaaagcctgaagccggtgctggagccaacc
tacggcattatcctgtatcaggaacaggttatgcagattgcccaggtgctttccggttat
acccttggcggcgcggatatgctgcgtcgtgctatgggtaaaaagaaaccggaagagatg
gccaagcagcgcggcacctttgaagagggcgcgatcaaaaacggcgtcgacggcgagctg
tcgatgaaaatctttgacctggtagagaaatttgccgggtacggcttcaacaaatcccac
tccgccgcctatgctttggtctcataccagacgctgtggctgaaggcgcactatccggca
gagtttatggcggcggtaatgaccgccgatatggacaacaccgagaaagtggttggcctg
gtggacgagtgctggcgcatggggctgaaggttctgtcgccggacattaactctggtctc
taccatttccacgttaacgatgacggggaaattgtttacggtatcggcgcgatcaaaggc
gtgggcgaaggccctattgaagccattatcgaagcgcgtaaccagggcgggcacttcctc
gatctctttgatttgtgtgcccgtaccgatattaaaaagctaaaccgcagggtgctggaa
aagctcattatgtccggggcatttgaccgacttgggccgcatcgcgccgcgctgatgaac
gctttgggtgatgcgctaaaggcggccgatcagcacgcgaaagcggaggctatcggtcag
gcggatatgtttggcgtgctggcagaagagccagagcaggtcgaaaaatcctacgccagc
gtgatcccatggccggatcaggtggtgctggaaggggagcgtgaaacgcttgggctgtac
cttaccggccacccgattaaccagtacctgaaagaaattgagcgctatgtcggtggcatg
cgcctgaaagagatgcacccgacagaacgtggtaaagtgaccacggctgcgggtctggtg
attgcttcgcgggttatggtcaccaagcggggtaatcgcatcggcatctgtacgctggat
gaccgttccggtcgtctggaagtgatgttattcacagatgcgctagaaaaataccagcat
ctgctggaaaaagaccgtatcctgatcgtcagcggacaggtcagctttgatgacttcagc
ggagggcttaagatgacggcccgcgagctgatggacatcgacgaagcccgtgaaaagtac
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccgt
ctccgtcagtctctggaaccccatcgttcggggacaattccagtacatctctactatcag
agggtggatgcacgtgcccggttgcgcttcggtgcgacatggcgcgtttcccctagcgat
cggttacttaacgatttgcgaacgctgattggttcggagcaggtggaactggagtttgac
taa
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