Cedecea lapagei: NCTC11466_03941
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Entry
NCTC11466_03941 CDS
T05810
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
clap
Cedecea lapagei
Pathway
clap03030
DNA replication
clap03430
Mismatch repair
clap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11466_03941 (holD)
03430 Mismatch repair
NCTC11466_03941 (holD)
03440 Homologous recombination
NCTC11466_03941 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clap03032
]
NCTC11466_03941 (holD)
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_03941 (holD)
Enzymes [BR:
clap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11466_03941 (holD)
DNA replication proteins [BR:
clap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11466_03941 (holD)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11466_03941 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
VEC01017
UniProt:
A0A3S5DPZ7
LinkDB
All DBs
Position
1:complement(3956377..3956796)
Genome browser
AA seq
139 aa
AA seq
DB search
MTSPSRRDWQLQQLGITQWVLRRPTALQGEIAVSLPAGVRLVMVAEALPALNDPLVKDIL
RSMALRPEQVMQLTPERAAMMPPDSRCNSWRLGVEQPLTLSGAQLASPALDELYHNGNAR
QALWQQICEHEHDIFPDAE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgacttccccttcccgacgcgactggcagttacagcagctgggtattacccagtgggtg
ctgcgccgtccgacggctttgcagggtgaaattgcggtctctttgccggctggcgtgcgt
ttggtgatggtcgccgaggcgctaccggcgctgaacgatccgctggtgaaggacatctta
cgcagtatggctttacgtcctgagcaagtgatgcagctgacgccggagcgcgccgcgatg
atgccgcccgacagccgctgcaacagctggcgcctgggcgtggagcagccgctgacgctg
agcggagcacagctcgcttcccccgcgctggacgagctttatcacaacggcaatgcgcga
caggcgctgtggcaacaaatttgcgaacatgaacacgatatcttccctgacgccgaatga
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