Cedecea lapagei: NCTC11466_04103
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Entry
NCTC11466_04103 CDS
T05810
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
clap
Cedecea lapagei
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NCTC11466_04103 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clap03019
]
NCTC11466_04103 (orn)
03009 Ribosome biogenesis [BR:
clap03009
]
NCTC11466_04103 (orn)
Messenger RNA biogenesis [BR:
clap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NCTC11466_04103 (orn)
Ribosome biogenesis [BR:
clap03009
]
Eukaryotic type
Pre-60S particles
RNases
NCTC11466_04103 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
VEC01191
UniProt:
A0A3S4JEG3
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All DBs
Position
1:complement(4115717..4116262)
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AA seq
181 aa
AA seq
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MSGNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPTIAVHQSDEQLALMDD
WNVRTHTASGLVERVKASTLDDRAAEQATIAFLQQWVPANTSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILPGFKKQGTHQAMDDIRESVAELAYYRENFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaaacgaaaacaatctgatttggattgatttagaaatgaccggtctcgatcct
gaacgggatcgcattattgagattgctaccctggtgacagatgccaacctgaacatcctg
gcagaagggcccaccatcgcggtacaccagtctgatgaacagctggcgctgatggacgac
tggaacgttcgtacccataccgccagtggtttggttgagcgggtgaaagccagcacgctt
gacgatcgcgcggcggagcaggcgacgattgcctttctgcagcagtgggtgccggcgaac
acttctcctatttgcggtaacagtattgggcaggatcgtcgcttcctgtttaagtacatg
ccggagctggaggcgtacttccactatcgctatctcgacgtcagcacgctgaaagagctg
gcacgtcgctggaagccggaaattctgcctggctttaaaaagcaggggactcaccaggcg
atggacgatattcgcgagtcggtggcggagcttgcttactaccgcgagaattttattaag
ctttaa
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