Cedecea lapagei: NCTC11466_04412
Help
Entry
NCTC11466_04412 CDS
T05810
Symbol
uvrD_4
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clap
Cedecea lapagei
Pathway
clap03420
Nucleotide excision repair
clap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC11466_04412 (uvrD_4)
03430 Mismatch repair
NCTC11466_04412 (uvrD_4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_04412 (uvrD_4)
Enzymes [BR:
clap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC11466_04412 (uvrD_4)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11466_04412 (uvrD_4)
MMR (mismatch excision repair)
Other MMR factors
NCTC11466_04412 (uvrD_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
VEC01756
UniProt:
A0A3S4J5T8
LinkDB
All DBs
Position
1:complement(4429903..4432065)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAATRSNMLVLAGAGSGKTRVLVHRIAWLMTVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDDKQWPARQAMWYINGKKDEGLRPHHVESYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNSIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTNNILNAANALIANN
SGRLGKELWTDGSDGEPISIYCAFNELDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQGSMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDQQLTLWQSCRLLLQEKALAGRAASALQRFMELIDALAHETADMPLHVQ
TDRVIKDSGLFMMYEQEKGEKGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEAYHRPSRFIGELPENCVEEVRLRASISRPVSHQRMG
TPIAQNDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaacgataaacagcgcgaagcggttgccgcc
acgcgcagcaacatgctggtgctggccggggcaggcagtggtaagacgcgggtacttgtg
caccgtatcgcatggttgatgacggtggaaaactgctcgccgtactccattatggcggtg
acctttaccaacaaagcggcggcggaaatgcgccaccgcattggccaactgatgggcacc
agccagggcggcatgtgggtcggcactttccacggtctggcacaccgtctgctgcgcgct
caccatatggacgcaaacctgccgcaggacttccagatcctcgacagcgaagatcagctg
cgcctgcttaagcgcctgattaaggcgatgaacctggatgataagcagtggccggcacgt
caggcgatgtggtacatcaacggtaaaaaagatgagggcctgcgcccgcaccacgtcgaa
agctacggcaatccggtggagcaaacgtggcagaaggtttaccaggcctatcaggaagcc
tgtgaccgcgcaggactggtggactttgccgagcttctgctgcgcgcccacgagctgtgg
cttaacaagccgcacattctgaatcactatcgcgagcgcttcaccaacatcctggtggac
gaattccaggacacaaacagcattcagtacgcgtggatccgcctgctggccggagatacc
ggcaaagtgatgatcgtgggcgatgatgaccagtcgatctacggctggcgtggggctcag
gttgaaaacatccagcggttcctgaatgacttcccgggggcgcaaaccatccgcctggag
caaaactaccgctcgacgaataacatccttaacgcagccaacgccctgatagccaataac
tccggccgacttggcaaagagctgtggaccgacggcagcgacggcgaaccgatctcgatc
tactgcgctttcaacgagctggacgaagcccgcttcgtggtcaaccgcattaaaacctgg
caggaaaacggcggtgcgctggagcagtgtgccattctgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagggaagcatgccttaccggatctacggcggcatg
cgcttcttcgaacgccaggaaatcaaagatgcgctctcctatctgcgcctgattgccaac
cgcaacgacgatgcggccttcgagcgtgtggtgaatacgccaacccgcggcatcggcgac
cgcacgcttgacgtcgtgcgtcagaccgcccgcgaccagcaattaacgctgtggcaatct
tgccgcctgctgctgcaggaaaaagcgctggccggtcgagctgcgtcggccctgcagcgt
tttatggagcttatcgacgcacttgcccatgaaacggcggatatgccgctgcatgtccag
accgatcgggtgattaaagattctggcctgttcatgatgtatgagcaggaaaaaggcgag
aaaggccagacccgtattgagaacttagaagagctggtaaccgcaacgcggcagtttagc
tacaacgacgaagatgaggatctgatgccgctgcaggcgtttctctctcacgctgcgctg
gaagcgggcgaagggcaggccgatacctggcaggatgcggtgcagctgatgacgctgcac
tcggcaaaaggtctcgaattcccgcaggtgtttatcgtggggatggaagagggcatgttc
ccaagccagatgtccctcgacgaggggggccgcctggaagaggagcgccgtctggcctac
gtcggcgtaacccgagcgatgcagaagctgacgctgacctatgcggaaacacgtcgcctg
tacggcaaagaagcctaccatcgcccttcgcgctttatcggcgagctgccggaaaactgc
gtcgaagaggtgcgtctgcgcgcaagtattagccgcccggtcagccatcagcgtatgggc
acaccgattgcgcagaacgattcagggttcagccttgggcagcgcgtacggcatcctaag
ttcggcgaaggcaccattgtgaacctggaaggcagcggcgagcacagccgcctgcaggtg
gcgttccaggggcaggggatcaagtggttagtcgccgcttatgctcgcctggaaacggtg
taa
DBGET
integrated database retrieval system
