Cedecea lapagei: NCTC11466_04416
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Entry
NCTC11466_04416 CDS
T05810
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
clap
Cedecea lapagei
Pathway
clap00300
Lysine biosynthesis
clap00470
D-Amino acid metabolism
clap01100
Metabolic pathways
clap01110
Biosynthesis of secondary metabolites
clap01120
Microbial metabolism in diverse environments
clap01230
Biosynthesis of amino acids
Module
clap_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC11466_04416 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC11466_04416 (dapF)
Enzymes [BR:
clap01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC11466_04416 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
VEC01764
UniProt:
A0A447V854
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All DBs
Position
1:complement(4434454..4435278)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHLGVGFDQLLIVEPPYDPDLDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKREIRVSTANGRMVLSVTEDERVCVNMGE
PNFEPSQVPFRANKAEKTYIMRAAEQTIMCGVVSMGNPHCVIQVDDVETAAVETLGPVME
SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACGAVAVGILQGLLAEQVRV
ELPGGRLDIAWKGPGSPLYMSGPAVHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctctaaaatgcatggcctcggtaatgactttatggtcgtcgacgcggtgacg
cagaatgtctatttctctccggagctgatccggcggctggcggatcgccatcttggggtg
ggattcgatcagctactgatcgtagagcctccttacgatcccgatctcgatttccactac
cggatcttcaatgccgacggcagcgaagtctctcagtgtggtaacggggctcgctgtttt
gcccgctttgtgcgcctgaaagggttgaccaataagcgagaaattcgcgtcagcaccgcc
aacggtcgtatggtgctgagcgtgacggaagatgagagggtgtgcgtcaatatgggcgaa
ccgaacttcgaaccttctcaggtgccgttccgggcaaacaaagcggaaaagacctatatt
atgcgtgccgccgaacaaaccattatgtgcggtgtggtctccatgggtaacccgcactgt
gtgatccaggtcgacgatgtggaaaccgccgcggtagaaaccctgggaccggtgatggag
agccatgagcgcttcccggaacgtgccaacatcggctttatgcaggtggtaagccgcgaa
cacattcgtctgcgtgtttacgagcgcggcgcgggagaaacccaggcctgcggcagcggc
gcctgcggcgcggtggcggttgggatcctgcaaggattactggcggagcaggttcgcgtt
gaactgcctggcggccgccttgatatcgcctggaaagggccgggttcaccgctgtatatg
tccggcccggcggtccacgtctatgatgggtttatacatctatga
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