KEGG   Cedecea lapagei: NCTC11466_04445
Entry
NCTC11466_04445   CDS       T05810                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase rhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
clap  Cedecea lapagei
Pathway
clap03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:clap00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC11466_04445 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clap03019]
    NCTC11466_04445 (rhlB)
Enzymes [BR:clap01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     NCTC11466_04445 (rhlB)
Messenger RNA biogenesis [BR:clap03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     NCTC11466_04445 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C CCDC138_C AAA_22
Other DBs
NCBI-ProteinID: VEC01805
UniProt: A0A3S4KX88
LinkDB
Position
1:4459577..4460845
AA seq 422 aa
MSKTHLTEKKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLANRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPVPENRQVNQPRALIMAPTRELAVQIHSDAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPVTQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQRTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEDYALNLSAIETYIGHSIPVSKYNAEALLNEFPPPKRLTRSRPGNGPRRGGAPRGNRRR
AG
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttgaccgaaaagaagttttccgacttcgccctgcaccctaaggtg
attgaagcccttgaaaataaagggttccataactgcaccccaattcaggcactggcactt
ccgctgactctggcgaatcgtgacgttgcagggcaggcgcaaaccggtacaggcaaaacg
atggcgtttctgacgtcaacgttccattatttactttctcacccggttcctgagaaccgc
caggtgaatcagccgcgcgccttgattatggcgccaacccgcgagttagcggtacagatt
cactcggatgcagaaccgctggctcaggcaacaggcctgaagcttggccttgcctatggc
ggcgacggctacgacaaacagctgaaagtgctggaaagcggcgtagatattttgattggc
accaccggtcgcctgatcgattacgccaaacaaaaccacattaacttaggtgccattcag
gttgtggtactggacgaagccgaccgcatgtacgacctcggcttcattaaagacatccgc
tggctgttccgccgcatgccgccggttacccagcgcctgaacatgttgttctctgcgacc
ctttcctatcgcgtacgtgagcttgcttttgagcagatgaacaatgcggaatatgttgaa
gttgaaccggagcagagaaccggccaccgcatcaaagaagagcttttctacccttctaac
gaagagaaaatgcgccttctgcaaacgcttattgaagaagagtggcccgatcgcgccatc
atctttgcgaacaccaaacatcgctgtgaagatatctggggtcatctggccgccgatggc
caccgcgttggcctgttaaccggtgatgtcgcacagaaaaaacgcctgcgtattctggaa
gagtttactcgtggcgatctggacattctggtcgccaccgacgttgcggctcgcggtctg
catatcccggccgtaacccacgtctttaactacgatctgccggacgactgcgaagattac
gttcaccgtattggccgtaccggccgtgccggggcaagcggtcactcgatcagcctcgcg
tgtgaagactacgcgctgaatctgtcggcgattgaaacctatattggccactcaattccg
gtgagcaaatataacgcagaagcactgttaaatgagttcccaccgcctaaacgtctgact
cgtagccgcccaggcaacggtccacgccgcggtggtgctcctcgtggtaatcgtcgtcgc
gcaggttaa

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