Cedecea lapagei: NCTC11466_04575
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Entry
NCTC11466_04575 CDS
T05810
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
clap
Cedecea lapagei
Pathway
clap03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clap00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC11466_04575 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clap03021
]
NCTC11466_04575 (rpoZ)
03400 DNA repair and recombination proteins [BR:
clap03400
]
NCTC11466_04575 (rpoZ)
Enzymes [BR:
clap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC11466_04575 (rpoZ)
Transcription machinery [BR:
clap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC11466_04575 (rpoZ)
DNA repair and recombination proteins [BR:
clap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC11466_04575 (rpoZ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
VEC02042
UniProt:
A0A3S4MJ18
LinkDB
All DBs
Position
1:4587243..4587518
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AA seq
91 aa
AA seq
DB search
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEENDKTTVIALREIEEGLIT
NQILDVRERQEQQEQEAAELQAVTAIAEGRR
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaaccgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
cttgtggccgcgcgtcgcgctcgtcagatgcaggttggcggtaaagatccgctggtaccg
gaagaaaacgataaaacgaccgttatcgcactgcgtgaaatcgaagaagggttgatcacc
aaccagatcctcgatgtacgtgagcgccaggagcagcaagagcaggaagccgcagaactg
caggccgtcactgctattgctgaaggtcgtcgttaa
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