Clostridium sp. BNL1100: Clo1100_0059
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Entry
Clo1100_0059 CDS
T01708
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
clb
Clostridium sp. BNL1100
Brite
KEGG Orthology (KO) [BR:
clb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clb03400
]
Clo1100_0059
DNA repair and recombination proteins [BR:
clb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Clo1100_0059
Archaeal homologous recombinant proteins
Clo1100_0059
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AEY64351
UniProt:
H2JF44
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All DBs
Position
61704..62870
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AA seq
388 aa
AA seq
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MKIIHTGDWHIGKIVNEFSMLEDQEYILNQLISVISNEKPDALVIAGDIFDRSIPPVDAI
ELVDRIFNTVLLDLRVPILAIAGNHDSAERLSFASRILTNNGLHIVGSFEGNVRKVVLED
AFGPVSFYLLPYSDPRNIKHILQDSEISTHDDAMKKLVEKVGQAMYENERSVMITHGYIT
YLGGQAEITSESERPLSIGGTDIVNSYHFNSFSYTALGHLHAPQRAGADNIRYSGSLLKY
SFSEVNQKKGINIVEIDGDGNSHVRLIELKPKRDMRIIKGPIGELLKPEVYATANTDDYI
YAILTDKGELIDPISKLRSVYPNVMGLTKESVMNRDDNKTSASEGYKSKAKIELFQEFYS
SIQGEPLTLEELKIVEKVIGEVETGGCK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataattcacacaggagactggcatattgggaaaattgtaaatgagttcagtatg
ctggaggatcaggagtatatactcaatcaacttatatccgttatatcaaatgaaaaaccc
gatgctttggtaattgcaggagatatatttgacaggagcataccgcccgtagatgcaatt
gaactggtggacaggattttcaatacagtcctccttgatttaagggttcctattcttgcc
attgccggaaaccatgacagtgctgagcgtttatcttttgccagcagaatactaacaaat
aacggactgcatattgttggtagctttgagggtaatgtgcgcaaagtggttttggaggat
gcttttgggccggtcagcttctaccttttaccttattcagacccccgtaacataaagcac
atattgcaggatagcgaaatatctacccatgacgatgccatgaaaaagcttgttgaaaaa
gttggacaagcaatgtatgaaaatgaaagaagtgtaatgattacacatggctacataact
tatcttggaggacaagcagaaattacaagtgaatcggagagaccacttagcatcgggggg
acggatatagttaattcgtatcactttaactcatttagctacactgctcttggacatctc
catgcgcctcaacgggcaggtgcagataatataaggtattccggctctttattgaaatac
tccttttcggaggttaaccagaagaagggtataaatatagttgaaattgatggtgacggt
aattcccatgtaaggttaatagaacttaaacctaaaagggatatgcgcattataaaaggc
cccattggcgagcttttgaaacctgaggtgtacgcaaccgcaaatactgatgactatata
tatgcaatattaacagacaagggcgagcttattgacccgatatcaaagctaagaagcgtt
tatcctaacgtaatgggacttaccaaggaaagtgtaatgaaccgggatgataacaaaact
tctgcatccgagggctataaatccaaagctaaaatagagctgtttcaggaattctatagc
tctatacagggagaacctttgactctggaggaactaaaaatagtggagaaggtaatagga
gaggtagaaacaggagggtgtaaatga
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